Drug interaction prediction using ontology-driven hypothetical assertion framework for pathway generation followed by numerical simulation
Arikuma, Takeshi, Yoshikawa, Sumi, Azuma, Ryuzo, Watanabe, Kentaro, Matsumura, Kazumi, Konagaya, Akihiko
Published in BMC bioinformatics (28.05.2008)
Published in BMC bioinformatics (28.05.2008)
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Journal Article
A novel protein distance matrix based on the minimum arc-length between two amino-acid residues on the surface of a globular protein
Hall, Damien, Li, Songling, Yamashita, Kazuo, Azuma, Ryuzo, Carver, John A., Standley, Daron M.
Published in Biophysical chemistry (01.06.2014)
Published in Biophysical chemistry (01.06.2014)
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Journal Article
2D1412 クライオ電子線トモグラフィーに対する超分解能技術(計測,口頭発表,日本生物物理学会第50回年会(2012年度))
Published in 生物物理
(2012)
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Journal Article
Particle simulation approach for subcellular dynamics and interactions of biological molecules
Azuma, Ryuzo, Kitagawa, Tetsuji, Kobayashi, Hiroshi, Konagaya, Akihiko
Published in BMC bioinformatics (12.12.2006)
Published in BMC bioinformatics (12.12.2006)
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Journal Article
All-atom molecular dynamics of film supported flat-shaped DNA origami in water
Azuma, Ryuzo, Kishi, Sae, Gutmann, Greg, Konagaya, Akihiko
Published in Chem-Bio Informatics Journal (01.01.2018)
Published in Chem-Bio Informatics Journal (01.01.2018)
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Journal Article
RNA–LIM: A novel procedure for analyzing protein/single-stranded RNA propensity data with concomitant estimation of interface structure
Hall, Damien, Li, Songling, Yamashita, Kazuo, Azuma, Ryuzo, Carver, John A., Standley, Daron M.
Published in Analytical biochemistry (01.03.2015)
Published in Analytical biochemistry (01.03.2015)
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Journal Article
Electrophoresis of a Polyelectrolyte in a Space with Immobile Obstacles
Azuma, Ryuzo, Takayama, Hajime
Published in Progress of theoretical physics. Supplement (01.01.2000)
Published in Progress of theoretical physics. Supplement (01.01.2000)
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Journal Article
3I1124 3次元構造の電子線トモグラフィーに対する新しい再構成計算技術(3I 蛋白質_計測・解析の方法論1,日本生物物理学会第49回年会)
Published in 生物物理
(15.08.2011)
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Journal Article
1P095 1F1355 電子線トモグラフィーの高速化 : 繰り返し再構成に対するGPGPUの活用(蛋白質-計測・解析の方法論,口頭発表,第48回日本生物物理学会年会)
Published in 生物物理
(15.08.2010)
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Journal Article
2P283 Mesoscopic simulation analyses on clustering in the cell surface : significance and mechanisms(Native and artificial biomembranes-dynamics,Poster Presentations)
Azuma, Ryuzo, Tsutsumi, Takahiro, Kobayashi, Hiroshi, Konagaya, Akihiko
Published in Seibutsu Butsuri (20.11.2007)
Published in Seibutsu Butsuri (20.11.2007)
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Journal Article
Discovering Dynamic Characteristics of Biochemical Pathways using Geometric Patterns among Parameter-Parameter Dependencies in Differential Equations
Azuma, Ryuzo, Umetsu, Ryo, Ohki, Shingo, Konishi, Fumikazu, Yoshikawa, Sumi, Konagaya, Akihiko, Matsumura, Kazumi
Published in New generation computing (01.08.2007)
Published in New generation computing (01.08.2007)
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Journal Article
2P-066 Development of Eos: efficient 3D reconstruction of biomolecules from electron micrographs by enabling GPU computing and use of stereoscopic devices(Protein:Measurement & Analysis,The 47th Annual Meeting of the Biophysical Society of Japan)
Azuma, Ryuzo, Jim, Mingyue, Takazaki, Hiroko, Tominaga, Akito, Fukuchi, Hiroaki, Ohta, Koki, Shirakawa, Keita, Tsukada, Yoshihiro, Tsurusaki, Seiya, Yoshitake, Junnichi, Yasunaga, Takuo
Published in Seibutsu Butsuri (20.09.2009)
Published in Seibutsu Butsuri (20.09.2009)
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