Tubule-U-Net: a novel dataset and deep learning-based tubule segmentation framework in whole slide images of breast cancer
Tekin, Eren, Yazıcı, Çisem, Kusetogullari, Huseyin, Tokat, Fatma, Yavariabdi, Amir, Iheme, Leonardo Obinna, Çayır, Sercan, Bozaba, Engin, Solmaz, Gizem, Darbaz, Berkan, Özsoy, Gülşah, Ayaltı, Samet, Kayhan, Cavit Kerem, İnce, Ümit, Uzel, Burak
Published in Scientific reports (04.01.2023)
Published in Scientific reports (04.01.2023)
Get full text
Journal Article
Whole slide histologic grading of breast cancer using convolutional neural networks
Demir, Gokhan, Iheme, Leonard O., Solmaz, Gizem, Yazici, Cisem, Tokat, Fatma, Çayır, Sercan, Bozaba, Engin, Tekin, Muhammet Eren, Özsoy, Gülşah, Ayaltı, Samet, Kayhan, Cavit Kerem, İnce, Ümit, Uzel, Burak, Kusetogullari, Huseyin
Published in Journal of clinical oncology (01.06.2022)
Published in Journal of clinical oncology (01.06.2022)
Get full text
Journal Article
MITNET: a novel dataset and a two-stage deep learning approach for mitosis recognition in whole slide images of breast cancer tissue
Çayır, Sercan, Solmaz, Gizem, Kusetogullari, Huseyin, Tokat, Fatma, Bozaba, Engin, Karakaya, Sencer, Iheme, Leonardo Obinna, Tekin, Eren, Yazıcı, Çisem, Özsoy, Gülşah, Ayaltı, Samet, Kayhan, Cavit Kerem, İnce, Ümit, Uzel, Burak, Kılıç, Onur
Published in Neural computing & applications (01.10.2022)
Published in Neural computing & applications (01.10.2022)
Get full text
Journal Article
Patch-Level Nuclear Pleomorphism Scoring Using Convolutional Neural Networks
Iheme, Leonardo O., Solmaz, Gizem, Tokat, Fatma, Çayir, Sercan, Bozaba, Engin, Yazici, Çisem, Özsoy, Gülşah, Ayalti, Samet, Kayhan, Cavit Kerem, İnce, Ümit
Published in Computer Analysis of Images and Patterns (2021)
Published in Computer Analysis of Images and Patterns (2021)
Get full text
Book Chapter
Nuclei Detection on Breast Cancer Histopathology Images Using RetinaNet
Bozaba, Engin, Solmaz, Gizem, Yazici, Cisem, Ozsoy, Gulsah, Tokat, Fatma, Iheme, Leonardo O., Cayir, Sercan, Ayalti, Samet, Kayhan, Cavit Kerem, Ince, Umit
Published in 2021 29th Signal Processing and Communications Applications Conference (SIU) (09.06.2021)
Published in 2021 29th Signal Processing and Communications Applications Conference (SIU) (09.06.2021)
Get full text
Conference Proceeding
Nuclei Segmentation in Hematoxylin and Eosin (H&E)-Stained Histopathological Images Using a Deep Neural Network
Cayir, Sercan, Tarcan, Serim Hande, Ayalti, Samet, Razavi, Salar, Khameneh, Fariba, Cetin, Sukru Burak, Solmaz, Gizem, Ozsoy, Gulsah, Yazici, Cisem, Kayhan, Cavit Kerem, Tokat, Fatma
Published in 2020 28th Signal Processing and Communications Applications Conference (SIU) (05.10.2020)
Published in 2020 28th Signal Processing and Communications Applications Conference (SIU) (05.10.2020)
Get full text
Conference Proceeding
An Automated and Accurate Methodology to Assess Ki-67 Labeling Index of Immunohistochemical Staining Images of Breast Cancer Tissues
Razavi, Salar, Khameneh, Fariba D., Serteli, Ercan Alp, Cayir, Sercan, Cetin, Sukru Burak, Hatipoglu, Gokhan, Ayalti, Samet, Kamasak, Mustafa
Published in 2018 25th International Conference on Systems, Signals and Image Processing (IWSSIP) (01.06.2018)
Published in 2018 25th International Conference on Systems, Signals and Image Processing (IWSSIP) (01.06.2018)
Get full text
Conference Proceeding
Automated cell segmentation and spot detection in fluorescence in situ hybridization staining to assess HER2 status in breast cancer
Cetin, Sukru Burak, Khameneh, Fariba D., Serteli, Ercan Alp, Cayir, Sercan, Hatipoglu, Gokhan, Kamasak, Mustafa, Ayalti, Samet, Razavi, Salar, Budancamanak, Yakup, Ozsoy, Gulsah
Published in 2018 26th Signal Processing and Communications Applications Conference (SIU) (01.05.2018)
Published in 2018 26th Signal Processing and Communications Applications Conference (SIU) (01.05.2018)
Get full text
Conference Proceeding
Segmentation of the main structures in Hematoxylin and Eosin images
Cayir, Sercan, Serteli, Ercan Alp, Ayalti, Samet, Cetin, Sukru Burak, Hatipoglu, Gokhan, Kamasak, Mustafa, Yazici, Cisem, Razavi, Salar, Khameneh, Fariba D., Yetik, Imam Samil, Cetin, Ekrem Cihad
Published in 2018 26th Signal Processing and Communications Applications Conference (SIU) (01.05.2018)
Published in 2018 26th Signal Processing and Communications Applications Conference (SIU) (01.05.2018)
Get full text
Conference Proceeding