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Published in Science (American Association for the Advancement of Science) (05.08.2016)
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Intra- and Inter-cellular Rewiring of the Human Colon during Ulcerative Colitis
Smillie, Christopher S., Biton, Moshe, Ordovas-Montanes, Jose, Sullivan, Keri M., Burgin, Grace, Graham, Daniel B., Herbst, Rebecca H., Rogel, Noga, Slyper, Michal, Waldman, Julia, Sud, Malika, Andrews, Elizabeth, Velonias, Gabriella, Haber, Adam L., Jagadeesh, Karthik, Vickovic, Sanja, Yao, Junmei, Stevens, Christine, Dionne, Danielle, Nguyen, Lan T., Villani, Alexandra-Chloé, Hofree, Matan, Creasey, Elizabeth A., Huang, Hailiang, Rozenblatt-Rosen, Orit, Garber, John J., Khalili, Hamed, Desch, A. Nicole, Daly, Mark J., Ananthakrishnan, Ashwin N., Shalek, Alex K., Xavier, Ramnik J., Regev, Aviv
Published in Cell (25.07.2019)
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Integrative molecular and clinical modeling of clinical outcomes to PD1 blockade in patients with metastatic melanoma
Liu, David, Schilling, Bastian, Liu, Derek, Sucker, Antje, Livingstone, Elisabeth, Jerby-Arnon, Livnat, Zimmer, Lisa, Gutzmer, Ralf, Satzger, Imke, Loquai, Carmen, Grabbe, Stephan, Vokes, Natalie, Margolis, Claire A, Conway, Jake, He, Meng Xiao, Elmarakeby, Haitham, Dietlein, Felix, Miao, Diana, Tracy, Adam, Gogas, Helen, Goldinger, Simone M, Utikal, Jochen, Blank, Christian U, Rauschenberg, Ricarda, von Bubnoff, Dagmar, Krackhardt, Angela, Weide, Benjamin, Haferkamp, Sebastian, Kiecker, Felix, Izar, Ben, Garraway, Levi, Regev, Aviv, Flaherty, Keith, Paschen, Annette, Van Allen, Eliezer M, Schadendorf, Dirk
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Single-Cell Transcriptomic Analysis of Primary and Metastatic Tumor Ecosystems in Head and Neck Cancer
Puram, Sidharth V., Tirosh, Itay, Parikh, Anuraag S., Patel, Anoop P., Yizhak, Keren, Gillespie, Shawn, Rodman, Christopher, Luo, Christina L., Mroz, Edmund A., Emerick, Kevin S., Deschler, Daniel G., Varvares, Mark A., Mylvaganam, Ravi, Rozenblatt-Rosen, Orit, Rocco, James W., Faquin, William C., Lin, Derrick T., Regev, Aviv, Bernstein, Bradley E.
Published in Cell (14.12.2017)
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A Cellular Taxonomy of the Bone Marrow Stroma in Homeostasis and Leukemia
Baryawno, Ninib, Przybylski, Dariusz, Kowalczyk, Monika S., Kfoury, Youmna, Severe, Nicolas, Gustafsson, Karin, Kokkaliaris, Konstantinos D., Mercier, Francois, Tabaka, Marcin, Hofree, Matan, Dionne, Danielle, Papazian, Ani, Lee, Dongjun, Ashenberg, Orr, Subramanian, Ayshwarya, Vaishnav, Eeshit Dhaval, Rozenblatt-Rosen, Orit, Regev, Aviv, Scadden, David T.
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Comprehensive Classification of Retinal Bipolar Neurons by Single-Cell Transcriptomics
Shekhar, Karthik, Lapan, Sylvain W., Whitney, Irene E., Tran, Nicholas M., Macosko, Evan Z., Kowalczyk, Monika, Adiconis, Xian, Levin, Joshua Z., Nemesh, James, Goldman, Melissa, McCarroll, Steven A., Cepko, Constance L., Regev, Aviv, Sanes, Joshua R.
Published in Cell (25.08.2016)
Published in Cell (25.08.2016)
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The BRAIN Initiative Cell Census Consortium: Lessons Learned toward Generating a Comprehensive Brain Cell Atlas
Ecker, Joseph R., Geschwind, Daniel H., Kriegstein, Arnold R., Ngai, John, Osten, Pavel, Polioudakis, Damon, Regev, Aviv, Sestan, Nenad, Wickersham, Ian R., Zeng, Hongkui
Published in Neuron (Cambridge, Mass.) (01.11.2017)
Published in Neuron (Cambridge, Mass.) (01.11.2017)
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Single cell RNA sequencing of human microglia uncovers a subset associated with Alzheimer's disease
Olah, Marta, Menon, Vilas, Habib, Naomi, Taga, Mariko F, Ma, Yiyi, Yung, Christina J, Cimpean, Maria, Khairallah, Anthony, Coronas-Samano, Guillermo, Sankowski, Roman, Grün, Dominic, Kroshilina, Alexandra A, Dionne, Danielle, Sarkis, Rani A, Cosgrove, Garth R, Helgager, Jeffrey, Golden, Jeffrey A, Pennell, Page B, Prinz, Marco, Vonsattel, Jean Paul G, Teich, Andrew F, Schneider, Julie A, Bennett, David A, Regev, Aviv, Elyaman, Wassim, Bradshaw, Elizabeth M, De Jager, Philip L
Published in Nature communications (30.11.2020)
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A revised airway epithelial hierarchy includes CFTR-expressing ionocytes
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Published in Nature (London) (01.08.2018)
Published in Nature (London) (01.08.2018)
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Multiplexed single-cell transcriptional response profiling to define cancer vulnerabilities and therapeutic mechanism of action
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Published in Nature communications (27.08.2020)
Published in Nature communications (27.08.2020)
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Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses
Cabili, Moran N, Trapnell, Cole, Goff, Loyal, Koziol, Magdalena, Tazon-Vega, Barbara, Regev, Aviv, Rinn, John L
Published in Genes & development (15.09.2011)
Published in Genes & development (15.09.2011)
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Molecular Classification and Comparative Taxonomics of Foveal and Peripheral Cells in Primate Retina
Peng, Yi-Rong, Shekhar, Karthik, Yan, Wenjun, Herrmann, Dustin, Sappington, Anna, Bryman, Gregory S., van Zyl, Tavé, Do, Michael Tri. H., Regev, Aviv, Sanes, Joshua R.
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Interactions between cancer cells and immune cells drive transitions to mesenchymal-like states in glioblastoma
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Published in Cancer cell (14.06.2021)
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Transcriptional mediators of treatment resistance in lethal prostate cancer
He, Meng Xiao, Cuoco, Michael S, Crowdis, Jett, Bosma-Moody, Alice, Zhang, Zhenwei, Bi, Kevin, Kanodia, Abhay, Su, Mei-Ju, Ku, Sheng-Yu, Garcia, Maria Mica, Sweet, Amalia R, Rodman, Christopher, DelloStritto, Laura, Silver, Rebecca, Steinharter, John, Shah, Parin, Izar, Benjamin, Walk, Nathan C, Burke, Kelly P, Bakouny, Ziad, Tewari, Alok K, Liu, David, Camp, Sabrina Y, Vokes, Natalie I, Salari, Keyan, Park, Jihye, Vigneau, Sébastien, Fong, Lawrence, Russo, Joshua W, Yuan, Xin, Balk, Steven P, Beltran, Himisha, Rozenblatt-Rosen, Orit, Regev, Aviv, Rotem, Asaf, Taplin, Mary-Ellen, Van Allen, Eliezer M
Published in Nature medicine (01.03.2021)
Published in Nature medicine (01.03.2021)
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Single-cell RNA-seq reveals changes in cell cycle and differentiation programs upon aging of hematopoietic stem cells
Kowalczyk, Monika S, Tirosh, Itay, Heckl, Dirk, Rao, Tata Nageswara, Dixit, Atray, Haas, Brian J, Schneider, Rebekka K, Wagers, Amy J, Ebert, Benjamin L, Regev, Aviv
Published in Genome research (01.12.2015)
Published in Genome research (01.12.2015)
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