miRNA-mRNA integrated analysis reveals roles for miRNAs in primary breast tumors
Enerly, Espen, Steinfeld, Israel, Kleivi, Kristine, Leivonen, Suvi-Katri, Aure, Miriam R, Russnes, Hege G, Rønneberg, Jo Anders, Johnsen, Hilde, Navon, Roy, Rødland, Einar, Mäkelä, Rami, Naume, Bjørn, Perälä, Merja, Kallioniemi, Olli, Kristensen, Vessela N, Yakhini, Zohar, Børresen-Dale, Anne-Lise
Published in PloS one (22.02.2011)
Published in PloS one (22.02.2011)
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Targeted exploration and analysis of large cross-platform human transcriptomic compendia
Zhu, Qian, Wong, Aaron K, Krishnan, Arjun, Aure, Miriam R, Tadych, Alicja, Zhang, Ran, Corney, David C, Greene, Casey S, Bongo, Lars A, Kristensen, Vessela N, Charikar, Moses, Li, Kai, Troyanskaya, Olga G
Published in Nature methods (01.03.2015)
Published in Nature methods (01.03.2015)
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A regulatory network comprising let-7 miRNA and SMUG1 is associated with good prognosis in ER+ breast tumours
Lirussi, Lisa, Ayyildiz, Dilara, Liu, Yan, Montaldo, Nicola P, Carracedo, Sergio, Aure, Miriam R, Jobert, Laure, Tekpli, Xavier, Touma, Joel, Sauer, Torill, Dalla, Emiliano, Kristensen, Vessela N, Geisler, Jürgen, Piazza, Silvano, Tell, Gianluca, Nilsen, Hilde
Published in Nucleic acids research (14.10.2022)
Published in Nucleic acids research (14.10.2022)
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Copy Number Gain of hsa-miR-569 at 3q26.2 Leads to Loss of TP53INP1 and Aggressiveness of Epithelial Cancers
Chaluvally-Raghavan, Pradeep, Zhang, Fan, Pradeep, Sunila, Hamilton, Mark P., Zhao, Xi, Rupaimoole, Rajesha, Moss, Tyler, Lu, Yiling, Yu, Shuangxing, Pecot, Chad V., Aure, Miriam R., Peuget, Sylvain, Rodriguez-Aguayo, Cristian, Han, Hee-Dong, Zhang, Dong, Venkatanarayan, Avinashnarayan, Krohn, Marit, Kristensen, Vessela N., Gagea, Mihai, Ram, Prahlad, Liu, Wenbin, Lopez-Berestein, Gabriel, Lorenzi, Philip L., Børresen-Dale, Anne-Lise, Chin, Koei, Gray, Joe, Dusetti, Nelson J., McGuire, Sean E., Flores, Elsa R., Sood, Anil K., Mills, Gordon B.
Published in Cancer cell (08.12.2014)
Published in Cancer cell (08.12.2014)
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Journal Article
Landscape of somatic mutations in 560 breast cancer whole-genome sequences
Nik-Zainal, Serena, Davies, Helen, Staaf, Johan, Ramakrishna, Manasa, Glodzik, Dominik, Zou, Xueqing, Martincorena, Inigo, Alexandrov, Ludmil B., Martin, Sancha, Wedge, David C., Van Loo, Peter, Ju, Young Seok, Smid, Marcel, Brinkman, Arie B., Morganella, Sandro, Aure, Miriam R., Lingjærde, Ole Christian, Langerød, Anita, Ringnér, Markus, Ahn, Sung-Min, Boyault, Sandrine, Brock, Jane E., Broeks, Annegien, Butler, Adam, Desmedt, Christine, Dirix, Luc, Dronov, Serge, Fatima, Aquila, Foekens, John A., Gerstung, Moritz, Hooijer, Gerrit K. J., Jang, Se Jin, Jones, David R., Kim, Hyung-Yong, King, Tari A., Krishnamurthy, Savitri, Lee, Hee Jin, Lee, Jeong-Yeon, Li, Yilong, McLaren, Stuart, Menzies, Andrew, Mustonen, Ville, O’Meara, Sarah, Pauporté, Iris, Pivot, Xavier, Purdie, Colin A., Raine, Keiran, Ramakrishnan, Kamna, Rodríguez-González, F. Germán, Romieu, Gilles, Sieuwerts, Anieta M., Simpson, Peter T., Shepherd, Rebecca, Stebbings, Lucy, Stefansson, Olafur A., Teague, Jon, Tommasi, Stefania, Treilleux, Isabelle, Van den Eynden, Gert G., Vermeulen, Peter, Vincent-Salomon, Anne, Yates, Lucy, Caldas, Carlos, Veer, Laura van’t, Tutt, Andrew, Knappskog, Stian, Tan, Benita Kiat Tee, Jonkers, Jos, Borg, Åke, Ueno, Naoto T., Sotiriou, Christos, Viari, Alain, Futreal, P. Andrew, Campbell, Peter J., Span, Paul N., Van Laere, Steven, Lakhani, Sunil R., Eyfjord, Jorunn E., Thompson, Alastair M., Birney, Ewan, Stunnenberg, Hendrik G., van de Vijver, Marc J., Martens, John W. M., Børresen-Dale, Anne-Lise, Richardson, Andrea L., Kong, Gu, Thomas, Gilles, Stratton, Michael R.
Published in Nature (London) (02.06.2016)
Published in Nature (London) (02.06.2016)
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Journal Article
Breast cancer quantitative proteome and proteogenomic landscape
Johansson, Henrik J., Socciarelli, Fabio, Vacanti, Nathaniel M., Haugen, Mads H., Zhu, Yafeng, Siavelis, Ioannis, Fernandez-Woodbridge, Alejandro, Aure, Miriam R., Sennblad, Bengt, Vesterlund, Mattias, Branca, Rui M., Orre, Lukas M., Huss, Mikael, Fredlund, Erik, Beraki, Elsa, Garred, Øystein, Boekel, Jorrit, Sauer, Torill, Zhao, Wei, Nord, Silje, Höglander, Elen K., Jans, Daniel C., Brismar, Hjalmar, Haukaas, Tonje H., Bathen, Tone F., Schlichting, Ellen, Naume, Bjørn, Luders, Torben, Borgen, Elin, Kristensen, Vessela N., Russnes, Hege G., Lingjærde, Ole Christian, Mills, Gordon B., Sahlberg, Kristine K., Børresen-Dale, Anne-Lise, Lehtiö, Janne
Published in Nature communications (08.04.2019)
Published in Nature communications (08.04.2019)
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Journal Article
Correction: miRNA-mRNA Integrated Analysis Reveals Roles for miRNAs in Primary Breast Tumors
Enerly, Espen, Steinfeld, Israel, Kleivi, Kristine, Leivonen, Suvi-Katri, Aure, Miriam R., Russnes, Hege G., Rønneberg, Jo Anders, Johnsen, Hilde, Navon, Roy, Rødland, Einar, Mäkelä, Rami, Naume, Bjørn, Perälä, Merja, Kallioniemi, Olli, Kristensen, Vessela N., Yakhini, Zohar, Børresen-Dale, Anne-Lise
Published in PloS one (10.09.2013)
Published in PloS one (10.09.2013)
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Journal Article
MicroRNA Networks in Breast Cancer Cells
Tahiri, Andliena, Aure, Miriam R, Kristensen, Vessela N
Published in Methods in molecular biology (Clifton, N.J.) (2018)
Published in Methods in molecular biology (Clifton, N.J.) (2018)
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Journal Article
Subtype‐specific micro‐RNA expression signatures in breast cancer progression
Haakensen, Vilde D., Nygaard, Vegard, Greger, Liliana, Aure, Miriam R., Fromm, Bastian, Bukholm, Ida R.K., Lüders, Torben, Chin, Suet‐Feung, Git, Anna, Caldas, Carlos, Kristensen, Vessela N., Brazma, Alvis, Børresen‐Dale, Anne‐Lise, Hovig, Eivind, Helland, Åslaug
Published in International journal of cancer (01.09.2016)
Published in International journal of cancer (01.09.2016)
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Journal Article
LIMT is a novel metastasis inhibiting lncRNA suppressed by EGF and downregulated in aggressive breast cancer
Sas‐Chen, Aldema, Aure, Miriam R, Leibovich, Limor, Carvalho, Silvia, Enuka, Yehoshua, Körner, Cindy, Polycarpou‐Schwarz, Maria, Lavi, Sara, Nevo, Nava, Kuznetsov, Yuri, Yuan, Justin, Azuaje, Francisco, Ulitsky, Igor, Diederichs, Sven, Wiemann, Stefan, Yakhini, Zohar, Kristensen, Vessela N, Børresen‐Dale, Anne‐Lise, Yarden, Yosef, Sauer, Torill, Geisler, Jürgen, Hofvind, Solveig, Bathen, Tone F, Borgen, Elin, Engebråten, Olav, Fodstad, Øystein, Garred, Øystein, Geitvik, Gry Aarum, Kåresen, Rolf, Naume, Bjørn, Mælandsmo, Gunhild Mari, Russnes, Hege G, Schlichting, Ellen, Sørlie, Therese, Lingjærde, Ole Christian, Sahlberg, Kristine Kleivi, Skjerven, Helle Kristine, Fritzman, Britt
Published in EMBO molecular medicine (01.09.2016)
Published in EMBO molecular medicine (01.09.2016)
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Influence of DNA copy number and mRNA levels on the expression of breast cancer related proteins
Myhre, Simen, Lingjærde, Ole-Christian, Hennessy, Bryan T., Aure, Miriam R., Carey, Mark S., Alsner, Jan, Tramm, Trine, Overgaard, Jens, Mills, Gordon B., Børresen-Dale, Anne-Lise, Sørlie, Therese
Published in Molecular oncology (01.06.2013)
Published in Molecular oncology (01.06.2013)
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Metabolic clusters of breast cancer in relation to gene- and protein expression subtypes
Haukaas, Tonje H, Euceda, Leslie R, Giskeødegård, Guro F, Lamichhane, Santosh, Krohn, Marit, Jernström, Sandra, Aure, Miriam R, Lingjærde, Ole C, Schlichting, Ellen, Garred, Øystein, Due, Eldri U, Mills, Gordon B, Sahlberg, Kristine K, Børresen-Dale, Anne-Lise, Bathen, Tone F
Published in Cancer & metabolism (27.06.2016)
Published in Cancer & metabolism (27.06.2016)
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Journal Article
Author Correction: Landscape of somatic mutations in 560 breast cancer whole-genome sequences
Nik-Zainal, Serena, Davies, Helen, Staaf, Johan, Ramakrishna, Manasa, Glodzik, Dominik, Zou, Xueqing, Martincorena, Inigo, Alexandrov, Ludmil B., Martin, Sancha, Wedge, David C., Van Loo, Peter, Ju, Young Seok, Smid, Marcel, Brinkman, Arie B., Morganella, Sandro, Aure, Miriam R., Lingjærde, Ole Christian, Langerød, Anita, Ringnér, Markus, Ahn, Sung-Min, Boyault, Sandrine, Brock, Jane E., Broeks, Annegien, Butler, Adam, Desmedt, Christine, Dirix, Luc, Dronov, Serge, Fatima, Aquila, Foekens, John A., Gerstung, Moritz, Hooijer, Gerrit K. J., Jang, Se Jin, Jones, David R., Kim, Hyung-Yong, King, Tari A., Krishnamurthy, Savitri, Lee, Hee Jin, Lee, Jeong-Yeon, Li, Yilong, McLaren, Stuart, Menzies, Andrew, Mustonen, Ville, O’Meara, Sarah, Pauporté, Iris, Pivot, Xavier, Purdie, Colin A., Raine, Keiran, Ramakrishnan, Kamna, Rodríguez-González, F. Germán, Romieu, Gilles, Sieuwerts, Anieta M., Simpson, Peter T., Shepherd, Rebecca, Stebbings, Lucy, Stefansson, Olafur A., Teague, Jon, Tommasi, Stefania, Treilleux, Isabelle, Van den Eynden, Gert G., Vermeulen, Peter, Vincent-Salomon, Anne, Yates, Lucy, Caldas, Carlos, van’t Veer, Laura, Tutt, Andrew, Knappskog, Stian, Tan, Benita Kiat Tee, Jonkers, Jos, Borg, Åke, Ueno, Naoto T., Sotiriou, Christos, Viari, Alain, Futreal, P. Andrew, Campbell, Peter J., Span, Paul N., Van Laere, Steven, Lakhani, Sunil R., Eyfjord, Jorunn E., Thompson, Alastair M., Birney, Ewan, Stunnenberg, Hendrik G., van de Vijver, Marc J., Martens, John W. M., Børresen-Dale, Anne-Lise, Richardson, Andrea L., Kong, Gu, Thomas, Gilles, Stratton, Michael R.
Published in Nature (London) (01.02.2019)
Published in Nature (London) (01.02.2019)
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DNA copy number motifs are strong and independent predictors of survival in breast cancer
Pladsen, Arne V., Nilsen, Gro, Rueda, Oscar M., Aure, Miriam R., Borgan, Ørnulf, Liestøl, Knut, Vitelli, Valeria, Frigessi, Arnoldo, Langerød, Anita, Mathelier, Anthony, Engebråten, Olav, Kristensen, Vessela, Wedge, David C., Van Loo, Peter, Caldas, Carlos, Børresen-Dale, Anne-Lise, Russnes, Hege G., Lingjærde, Ole Christian
Published in Communications biology (02.04.2020)
Published in Communications biology (02.04.2020)
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The repertoire of mutational signatures in human cancer
Alexandrov, Ludmil B., Kim, Jaegil, Haradhvala, Nicholas J., Huang, Mi Ni, Tian Ng, Alvin Wei, Wu, Yang, Boot, Arnoud, Covington, Kyle R., Gordenin, Dmitry A., Bergstrom, Erik N., Islam, S. M. Ashiqul, Lopez-Bigas, Nuria, Klimczak, Leszek J., McPherson, John R., Morganella, Sandro, Sabarinathan, Radhakrishnan, Wheeler, David A., Mustonen, Ville, Getz, Gad, Rozen, Steven G., Stratton, Michael R.
Published in Nature (London) (06.02.2020)
Published in Nature (London) (06.02.2020)
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Pan-cancer analysis of whole genomes
Campbell, Peter J, Getz, Gad, Korbel, Jan O, Stuart, Joshua M, Jennings, Jennifer L, Stein, Lincoln D, Perry, Marc D
Published in Nature (London) (06.02.2020)
Published in Nature (London) (06.02.2020)
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Comprehensive molecular characterization of mitochondrial genomes in human cancers
Yuan, Yuan, Ju, Young Seok, Kim, Youngwook, Li, Jun, Wang, Yumeng, Yoon, Christopher J., Yang, Yang, Martincorena, Inigo, Creighton, Chad J., Weinstein, John N., Xu, Yanxun, Han, Leng, Kim, Hyung-Lae, Nakagawa, Hidewaki, Park, Keunchil, Campbell, Peter J., Liang, Han
Published in Nature genetics (01.03.2020)
Published in Nature genetics (01.03.2020)
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The landscape of viral associations in human cancers
Zapatka, Marc, Borozan, Ivan, Brewer, Daniel S., Iskar, Murat, Grundhoff, Adam, Alawi, Malik, Desai, Nikita, Sültmann, Holger, Moch, Holger, Cooper, Colin S., Eils, Roland, Ferretti, Vincent, Lichter, Peter
Published in Nature genetics (01.03.2020)
Published in Nature genetics (01.03.2020)
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A deep learning system accurately classifies primary and metastatic cancers using passenger mutation patterns
Jiao, Wei, Atwal, Gurnit, Polak, Paz, Karlic, Rosa, Cuppen, Edwin, Danyi, Alexandra, de Ridder, Jeroen, van Herpen, Carla, Lolkema, Martijn P., Steeghs, Neeltje, Getz, Gad, Morris, Quaid D., Stein, Lincoln D.
Published in Nature communications (05.02.2020)
Published in Nature communications (05.02.2020)
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Divergent mutational processes distinguish hypoxic and normoxic tumours
Bhandari, Vinayak, Li, Constance H., Bristow, Robert G., Boutros, Paul C.
Published in Nature communications (05.02.2020)
Published in Nature communications (05.02.2020)
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