Archaea on human skin
Probst, Alexander J, Auerbach, Anna K, Moissl-Eichinger, Christine
Published in PloS one (12.06.2013)
Published in PloS one (12.06.2013)
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Journal Article
Extensive Promoter-Centered Chromatin Interactions Provide a Topological Basis for Transcription Regulation
Li, Guoliang, Ruan, Xiaoan, Auerbach, Raymond K., Sandhu, Kuljeet Singh, Zheng, Meizhen, Wang, Ping, Poh, Huay Mei, Goh, Yufen, Lim, Joanne, Zhang, Jingyao, Sim, Hui Shan, Peh, Su Qin, Mulawadi, Fabianus Hendriyan, Ong, Chin Thing, Orlov, Yuriy L., Hong, Shuzhen, Zhang, Zhizhuo, Landt, Steve, Raha, Debasish, Euskirchen, Ghia, Wei, Chia-Lin, Ge, Weihong, Wang, Huaien, Davis, Carrie, Fisher-Aylor, Katherine I., Mortazavi, Ali, Gerstein, Mark, Gingeras, Thomas, Wold, Barbara, Sun, Yi, Fullwood, Melissa J., Cheung, Edwin, Liu, Edison, Sung, Wing-Kin, Snyder, Michael, Ruan, Yijun
Published in Cell (20.01.2012)
Published in Cell (20.01.2012)
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Journal Article
Diverse roles and interactions of the SWI/SNF chromatin remodeling complex revealed using global approaches
Euskirchen, Ghia M, Auerbach, Raymond K, Davidov, Eugene, Gianoulis, Tara A, Zhong, Guoneng, Rozowsky, Joel, Bhardwaj, Nitin, Gerstein, Mark B, Snyder, Michael
Published in PLoS genetics (01.03.2011)
Published in PLoS genetics (01.03.2011)
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Journal Article
Mapping Accessible Chromatin Regions Using Sono-Seq
Auerbach, Raymond K., Euskirchen, Ghia, Rozowsky, Joel, Lamarre-Vincent, Nathan, Moqtaderi, Zarmik, Lefrançois, Philippe, Struhl, Kevin, Gerstein, Mark, Snyder, Michael, Ruddle, Francis H.
Published in Proceedings of the National Academy of Sciences - PNAS (01.09.2009)
Published in Proceedings of the National Academy of Sciences - PNAS (01.09.2009)
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Journal Article
Efficient yeast ChIP-Seq using multiplex short-read DNA sequencing
Lefrançois, Philippe, Euskirchen, Ghia M, Auerbach, Raymond K, Rozowsky, Joel, Gibson, Theodore, Yellman, Christopher M, Gerstein, Mark, Snyder, Michael
Published in BMC genomics (21.01.2009)
Published in BMC genomics (21.01.2009)
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Journal Article
Quo vadis? Microbial profiling revealed strong effects of cleanroom maintenance and routes of contamination in indoor environments
Moissl-Eichinger, Christine, Auerbach, Anna K., Probst, Alexander J., Mahnert, Alexander, Tom, Lauren, Piceno, Yvette, Andersen, Gary L., Venkateswaran, Kasthuri, Rettberg, Petra, Barczyk, Simon, Pukall, Rüdiger, Berg, Gabriele
Published in Scientific reports (17.03.2015)
Published in Scientific reports (17.03.2015)
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Journal Article
Phylogeography of Francisella tularensis: Global Expansion of a Highly Fit Clone
VOGLER, Amy J, BIRDSELL, Dawn, PETERSEN, Jeannine M, PEARSON, Talima, VAISSAIRE, Josée, DEMPSEY, Michael P, FOXALL, Paul, ENGELTHALER, David M, WAGNER, David M, KEIM, Paul, PRICE, Lance B, BOWERS, Jolene R, BECKSTROM-STERNBERG, Stephen M, AUERBACH, Raymond K, BECKSTROM-STERNBERG, James S, JOHANSSON, Anders, CLARE, Ashley, BUCHHAGEN, Jordan L
Published in Journal of Bacteriology (01.04.2009)
Published in Journal of Bacteriology (01.04.2009)
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Journal Article
A Horizontal Gene Transfer Event Defines Two Distinct Groups within Burkholderia pseudomallei That Have Dissimilar Geographic Distributions
TUANYOK, Apichai, AUERBACH, Raymond K, PEACOCK, Sharon J, CURRIE, Bart J, KEIM, Paul, WAGNER, David M, BRETTIN, Thomas S, BRUCE, David C, MUNK, A. Christine, DETTER, J. Chris, PEARSON, Talima, HORNSTRA, Heidie, SERMSWAN, Rasana W, WUTHIEKANUN, Vanaporn
Published in Journal of Bacteriology (01.12.2007)
Published in Journal of Bacteriology (01.12.2007)
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Journal Article
SWI/SNF Chromatin-remodeling Factors: Multiscale Analyses and Diverse Functions
Euskirchen, Ghia, Auerbach, Raymond K., Snyder, Michael
Published in The Journal of biological chemistry (07.09.2012)
Published in The Journal of biological chemistry (07.09.2012)
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Journal Article
Complete genomic characterization of a pathogenic A.II strain of Francisella tularensis subspecies tularensis
Beckstrom-Sternberg, Stephen M, Auerbach, Raymond K, Godbole, Shubhada, Pearson, John V, Beckstrom-Sternberg, James S, Deng, Zuoming, Munk, Christine, Kubota, Kristy, Zhou, Yan, Bruce, David, Noronha, Jyothi, Scheuermann, Richard H, Wang, Aihui, Wei, Xianying, Wang, Jianjun, Hao, Jicheng, Wagner, David M, Brettin, Thomas S, Brown, Nancy, Gilna, Paul, Keim, Paul S
Published in PloS one (26.09.2007)
Published in PloS one (26.09.2007)
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Journal Article
Genomic islands from five strains of Burkholderia pseudomallei
Tuanyok, Apichai, Leadem, Benjamin R, Auerbach, Raymond K, Beckstrom-Sternberg, Stephen M, Beckstrom-Sternberg, James S, Mayo, Mark, Wuthiekanun, Vanaporn, Brettin, Thomas S, Nierman, William C, Peacock, Sharon J, Currie, Bart J, Wagner, David M, Keim, Paul
Published in BMC genomics (27.11.2008)
Published in BMC genomics (27.11.2008)
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Journal Article
Yersinia pestis evolution on a small timescale: comparison of whole genome sequences from North America
Auerbach, Raymond K, Tuanyok, Apichai, Probert, William S, Kenefic, Leo, Vogler, Amy J, Bruce, David C, Munk, Christine, Brettin, Thomas S, Eppinger, Mark, Ravel, Jacques, Wagner, David M, Keim, Paul
Published in PloS one (22.08.2007)
Published in PloS one (22.08.2007)
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Journal Article
The real cost of sequencing: higher than you think
Sboner, Andrea, Mu, Xinmeng Jasmine, Greenbaum, Dov, Auerbach, Raymond K, Gerstein, Mark B
Published in Genome biology (25.08.2011)
Published in Genome biology (25.08.2011)
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Journal Article
Centromere-like regions in the budding yeast genome
Lefrançois, Philippe, Auerbach, Raymond K, Yellman, Christopher M, Roeder, G Shirleen, Snyder, Michael
Published in PLoS genetics (01.01.2013)
Published in PLoS genetics (01.01.2013)
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Journal Article
Structured digital tables on the Semantic Web: toward a structured digital literature
Gerstein, Mark B, Samwald, Matthias, Auerbach, Raymond K, Cheung, Kei-Hoi
Published in Molecular systems biology (24.08.2010)
Published in Molecular systems biology (24.08.2010)
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Journal Article
PeakSeq enables systematic scoring of ChIP-seq experiments relative to controls
Rozowsky, Joel, Gerstein, Mark B, Euskirchen, Ghia, Auerbach, Raymond K, Zhang, Zhengdong D, Gibson, Theodore, Bjornson, Robert, Carriero, Nicholas, Snyder, Michael
Published in Nature biotechnology (01.01.2009)
Published in Nature biotechnology (01.01.2009)
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Journal Article
Francisella tularensis subsp. novicida isolated from a human in Arizona
Birdsell, Dawn N, Stewart, Tasha, Vogler, Amy J, Lawaczeck, Elisabeth, Diggs, Alisa, Sylvester, Tammy L, Buchhagen, Jordan L, Auerbach, Raymond K, Keim, Paul, Wagner, David M
Published in BMC research notes (06.11.2009)
Published in BMC research notes (06.11.2009)
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Journal Article
A North American Yersinia pestis draft genome sequence: SNPs and phylogenetic analysis
Touchman, Jeffrey W, Wagner, David M, Hao, Jicheng, Mastrian, Stephen D, Shah, Maulik K, Vogler, Amy J, Allender, Christopher J, Clark, Erin A, Benitez, Debbie S, Youngkin, David J, Girard, Jessica M, Auerbach, Raymond K, Beckstrom-Sternberg, Stephen M, Keim, Paul
Published in PloS one (21.02.2007)
Published in PloS one (21.02.2007)
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