Platanus-allee is a de novo haplotype assembler enabling a comprehensive access to divergent heterozygous regions
Kajitani, Rei, Yoshimura, Dai, Okuno, Miki, Minakuchi, Yohei, Kagoshima, Hiroshi, Fujiyama, Asao, Kubokawa, Kaoru, Kohara, Yuji, Toyoda, Atsushi, Itoh, Takehiko
Published in Nature communications (12.04.2019)
Published in Nature communications (12.04.2019)
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The genomic landscape at a late stage of stickleback speciation: High genomic divergence interspersed by small localized regions of introgression
Ravinet, Mark, Yoshida, Kohta, Shigenobu, Shuji, Toyoda, Atsushi, Fujiyama, Asao, Kitano, Jun
Published in PLoS genetics (23.05.2018)
Published in PLoS genetics (23.05.2018)
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Tracing the emergence of a novel sex-determining gene in medaka, Oryzias luzonensis
Myosho, Taijun, Otake, Hiroyuki, Masuyama, Haruo, Matsuda, Masaru, Kuroki, Yoko, Fujiyama, Asao, Naruse, Kiyoshi, Hamaguchi, Satoshi, Sakaizumi, Mitsuru
Published in Genetics (Austin) (01.05.2012)
Published in Genetics (Austin) (01.05.2012)
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High-quality genome assembly of the silkworm, Bombyx mori
Kawamoto, Munetaka, Jouraku, Akiya, Toyoda, Atsushi, Yokoi, Kakeru, Minakuchi, Yohei, Katsuma, Susumu, Fujiyama, Asao, Kiuchi, Takashi, Yamamoto, Kimiko, Shimada, Toru
Published in Insect biochemistry and molecular biology (01.04.2019)
Published in Insect biochemistry and molecular biology (01.04.2019)
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Efficient de novo assembly of highly heterozygous genomes from whole-genome shotgun short reads
Kajitani, Rei, Toshimoto, Kouta, Noguchi, Hideki, Toyoda, Atsushi, Ogura, Yoshitoshi, Okuno, Miki, Yabana, Mitsuru, Harada, Masayuki, Nagayasu, Eiji, Maruyama, Haruhiko, Kohara, Yuji, Fujiyama, Asao, Hayashi, Tetsuya, Itoh, Takehiko
Published in Genome research (01.08.2014)
Published in Genome research (01.08.2014)
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Using the Acropora digitifera genome to understand coral responses to environmental change
Shinzato, Chuya, Shoguchi, Eiichi, Kawashima, Takeshi, Hamada, Mayuko, Hisata, Kanako, Tanaka, Makiko, Fujie, Manabu, Fujiwara, Mayuki, Koyanagi, Ryo, Ikuta, Tetsuro, Fujiyama, Asao, Miller, David J., Satoh, Nori
Published in Nature (London) (18.08.2011)
Published in Nature (London) (18.08.2011)
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Germline mutation rates and the long-term phenotypic effects of mutation accumulation in wild-type laboratory mice and mutator mice
Uchimura, Arikuni, Higuchi, Mayumi, Minakuchi, Yohei, Ohno, Mizuki, Toyoda, Atsushi, Fujiyama, Asao, Miura, Ikuo, Wakana, Shigeharu, Nishino, Jo, Yagi, Takeshi
Published in Genome research (01.08.2015)
Published in Genome research (01.08.2015)
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Co-option of Sox3 as the male-determining factor on the Y chromosome in the fish Oryzias dancena
Takehana, Yusuke, Matsuda, Masaru, Myosho, Taijun, Suster, Maximiliano L., Kawakami, Koichi, Shin-I, Tadasu, Kohara, Yuji, Kuroki, Yoko, Toyoda, Atsushi, Fujiyama, Asao, Hamaguchi, Satoshi, Sakaizumi, Mitsuru, Naruse, Kiyoshi
Published in Nature communications (20.06.2014)
Published in Nature communications (20.06.2014)
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A map of rice genome variation reveals the origin of cultivated rice
Huang, Xuehui, Kurata, Nori, Wei, Xinghua, Wang, Zi-Xuan, Wang, Ahong, Zhao, Qiang, Zhao, Yan, Liu, Kunyan, Lu, Hengyun, Li, Wenjun, Guo, Yunli, Lu, Yiqi, Zhou, Congcong, Fan, Danlin, Weng, Qijun, Zhu, Chuanrang, Huang, Tao, Zhang, Lei, Wang, Yongchun, Feng, Lei, Furuumi, Hiroyasu, Kubo, Takahiko, Miyabayashi, Toshie, Yuan, Xiaoping, Xu, Qun, Dong, Guojun, Zhan, Qilin, Li, Canyang, Fujiyama, Asao, Toyoda, Atsushi, Lu, Tingting, Feng, Qi, Qian, Qian, Li, Jiayang, Han, Bin
Published in Nature (London) (25.10.2012)
Published in Nature (London) (25.10.2012)
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Extremotolerant tardigrade genome and improved radiotolerance of human cultured cells by tardigrade-unique protein
Hashimoto, Takuma, Horikawa, Daiki D., Saito, Yuki, Kuwahara, Hirokazu, Kozuka-Hata, Hiroko, Shin-I, Tadasu, Minakuchi, Yohei, Ohishi, Kazuko, Motoyama, Ayuko, Aizu, Tomoyuki, Enomoto, Atsushi, Kondo, Koyuki, Tanaka, Sae, Hara, Yuichiro, Koshikawa, Shigeyuki, Sagara, Hiroshi, Miura, Toru, Yokobori, Shin-ichi, Miyagawa, Kiyoshi, Suzuki, Yutaka, Kubo, Takeo, Oyama, Masaaki, Kohara, Yuji, Fujiyama, Asao, Arakawa, Kazuharu, Katayama, Toshiaki, Toyoda, Atsushi, Kunieda, Takekazu
Published in Nature communications (20.09.2016)
Published in Nature communications (20.09.2016)
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The Transgenic RNAi Project at Harvard Medical School: Resources and Validation
Perkins, Lizabeth A, Holderbaum, Laura, Tao, Rong, Hu, Yanhui, Sopko, Richelle, McCall, Kim, Yang-Zhou, Donghui, Flockhart, Ian, Binari, Richard, Shim, Hye-Seok, Miller, Audrey, Housden, Amy, Foos, Marianna, Randkelv, Sakara, Kelley, Colleen, Namgyal, Pema, Villalta, Christians, Liu, Lu-Ping, Jiang, Xia, Huan-Huan, Qiao, Wang, Xia, Fujiyama, Asao, Toyoda, Atsushi, Ayers, Kathleen, Blum, Allison, Czech, Benjamin, Neumuller, Ralph, Yan, Dong, Cavallaro, Amanda, Hibbard, Karen, Hall, Don, Cooley, Lynn, Hannon, Gregory J, Lehmann, Ruth, Parks, Annette, Mohr, Stephanie E, Ueda, Ryu, Kondo, Shu, Ni, Jian-Quan, Perrimon, Norbert
Published in Genetics (Austin) (01.11.2015)
Published in Genetics (Austin) (01.11.2015)
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A biochemical landscape of A-to-I RNA editing in the human brain transcriptome
Sakurai, Masayuki, Ueda, Hiroki, Yano, Takanori, Okada, Shunpei, Terajima, Hideki, Mitsuyama, Toutai, Toyoda, Atsushi, Fujiyama, Asao, Kawabata, Hitomi, Suzuki, Tsutomu
Published in Genome research (01.03.2014)
Published in Genome research (01.03.2014)
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Draft Assembly of the Symbiodinium minutum Nuclear Genome Reveals Dinoflagellate Gene Structure
Shoguchi, Eiichi, Shinzato, Chuya, Kawashima, Takeshi, Gyoja, Fuki, Mungpakdee, Sutada, Koyanagi, Ryo, Takeuchi, Takeshi, Hisata, Kanako, Tanaka, Makiko, Fujiwara, Mayuki, Hamada, Mayuko, Seidi, Azadeh, Fujie, Manabu, Usami, Takeshi, Goto, Hiroki, Yamasaki, Shinichi, Arakaki, Nana, Suzuki, Yutaka, Sugano, Sumio, Toyoda, Atsushi, Kuroki, Yoko, Fujiyama, Asao, Medina, Mónica, Coffroth, Mary Alice, Bhattacharya, Debashish, Satoh, Nori
Published in Current biology (05.08.2013)
Published in Current biology (05.08.2013)
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Identification of RNF213 as a susceptibility gene for moyamoya disease and its possible role in vascular development
Liu, Wanyang, Morito, Daisuke, Takashima, Seiji, Mineharu, Yohei, Kobayashi, Hatasu, Hitomi, Toshiaki, Hashikata, Hirokuni, Matsuura, Norio, Yamazaki, Satoru, Toyoda, Atsushi, Kikuta, Ken-ichiro, Takagi, Yasushi, Harada, Kouji H, Fujiyama, Asao, Herzig, Roman, Krischek, Boris, Zou, Liping, Kim, Jeong Eun, Kitakaze, Masafumi, Miyamoto, Susumu, Nagata, Kazuhiro, Hashimoto, Nobuo, Koizumi, Akio
Published in PloS one (20.07.2011)
Published in PloS one (20.07.2011)
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A genetic mechanism for female-limited Batesian mimicry in Papilio butterfly
Nishikawa, Hideki, Iijima, Takuro, Kajitani, Rei, Yamaguchi, Junichi, Ando, Toshiya, Suzuki, Yutaka, Sugano, Sumio, Fujiyama, Asao, Kosugi, Shunichi, Hirakawa, Hideki, Tabata, Satoshi, Ozaki, Katsuhisa, Morimoto, Hiroya, Ihara, Kunio, Obara, Madoka, Hori, Hiroshi, Itoh, Takehiko, Fujiwara, Haruhiko
Published in Nature genetics (01.04.2015)
Published in Nature genetics (01.04.2015)
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Hybrid Origins of Citrus Varieties Inferred from DNA Marker Analysis of Nuclear and Organelle Genomes
Shimizu, Tokurou, Kitajima, Akira, Nonaka, Keisuke, Yoshioka, Terutaka, Ohta, Satoshi, Goto, Shingo, Toyoda, Atsushi, Fujiyama, Asao, Mochizuki, Takako, Nagasaki, Hideki, Kaminuma, Eli, Nakamura, Yasukazu
Published in PloS one (30.11.2016)
Published in PloS one (30.11.2016)
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A divergent RWP‐RK transcription factor determines mating type in heterothallic Closterium
Sekimoto, Hiroyuki, Komiya, Ayumi, Tsuyuki, Natsumi, Kawai, Junko, Kanda, Naho, Ootsuki, Ryo, Suzuki, Yutaka, Toyoda, Atsushi, Fujiyama, Asao, Kasahara, Masahiro, Abe, Jun, Tsuchikane, Yuki, Nishiyama, Tomoaki
Published in The New phytologist (01.03.2023)
Published in The New phytologist (01.03.2023)
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MITOPLD Is a Mitochondrial Protein Essential for Nuage Formation and piRNA Biogenesis in the Mouse Germline
Watanabe, Toshiaki, Chuma, Shinichiro, Yamamoto, Yasuhiro, Kuramochi-Miyagawa, Satomi, Totoki, Yasushi, Toyoda, Atsushi, Hoki, Yuko, Fujiyama, Asao, Shibata, Tatsuhiro, Sado, Takashi, Noce, Toshiaki, Nakano, Toru, Nakatsuji, Norio, Lin, Haifan, Sasaki, Hiroyuki
Published in Developmental cell (15.03.2011)
Published in Developmental cell (15.03.2011)
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Genome-wide association study and genomic prediction in citrus: Potential of genomics-assisted breeding for fruit quality traits
Minamikawa, Mai F., Nonaka, Keisuke, Kaminuma, Eli, Kajiya-Kanegae, Hiromi, Onogi, Akio, Goto, Shingo, Yoshioka, Terutaka, Imai, Atsushi, Hamada, Hiroko, Hayashi, Takeshi, Matsumoto, Satomi, Katayose, Yuichi, Toyoda, Atsushi, Fujiyama, Asao, Nakamura, Yasukazu, Shimizu, Tokurou, Iwata, Hiroyoshi
Published in Scientific reports (05.07.2017)
Published in Scientific reports (05.07.2017)
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