Alternative expression analysis by RNA sequencing
Marra, Marco A, Griffith, Malachi, Griffith, Obi L, Mwenifumbo, Jill, Goya, Rodrigo, Morrissy, A Sorana, Morin, Ryan D, Corbett, Richard, Tang, Michelle J, Hou, Ying-Chen, Pugh, Trevor J, Robertson, Gordon, Chittaranjan, Suganthi, Ally, Adrian, Asano, Jennifer K, Chan, Susanna Y, Li, Haiyan I, McDonald, Helen, Teague, Kevin, Zhao, Yongjun, Zeng, Thomas, Delaney, Allen, Hirst, Martin, Morin, Gregg B, Jones, Steven J M, Tai, Isabella T
Published in Nature methods (01.10.2010)
Published in Nature methods (01.10.2010)
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Journal Article
Automated Library Construction and Analysis for High-Throughput Nanopore Sequencing of SARS-CoV-2
Coope, Robin J N, Matic, Nancy, Pandoh, Pawan K, Corbett, Richard D, Smailus, Duane E, Pleasance, Stephen, Lowe, Christopher F, Ritchie, Gordon, Chorlton, Samuel D, Young, Matthew, Ally, Adrian A, Asano, Jennifer K, Carlsen, Rebecca E, Chahal, Sundeep S, Zhao, Yongjun, Holmes, Daniel T, Romney, Marc G, Jones, Steven J M, Marra, Marco A
Published in The journal of applied laboratory medicine (01.09.2022)
Published in The journal of applied laboratory medicine (01.09.2022)
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Journal Article
Assessment of algorithms for high throughput detection of genomic copy number variation in oligonucleotide microarray data
Baross, Agnes, Delaney, Allen D, Li, H Irene, Nayar, Tarun, Flibotte, Stephane, Qian, Hong, Chan, Susanna Y, Asano, Jennifer, Ally, Adrian, Cao, Manqiu, Birch, Patricia, Brown-John, Mabel, Fernandes, Nicole, Go, Anne, Kennedy, Giulia, Langlois, Sylvie, Eydoux, Patrice, Friedman, J M, Marra, Marco A
Published in BMC bioinformatics (02.10.2007)
Published in BMC bioinformatics (02.10.2007)
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Journal Article
ALEXA: a microarray design platform for alternative expression analysis
Marra, Marco A, Griffith, Malachi, Tang, Michelle J, Griffith, Obi L, Morin, Ryan D, Chan, Susanna Y, Asano, Jennifer K, Zeng, Thomas, Flibotte, Stephane, Ally, Adrian, Baross, Agnes, Hirst, Martin, Jones, Steven J M, Morin, Gregg B, Tai, Isabella T
Published in Nature methods (01.02.2008)
Published in Nature methods (01.02.2008)
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Journal Article
Large-scale production of SAGE libraries from microdissected tissues, flow-sorted cells, and cell lines
Khattra, Jaswinder, Delaney, Allen D, Zhao, Yongjun, Siddiqui, Asim, Asano, Jennifer, McDonald, Helen, Pandoh, Pawan, Dhalla, Noreen, Prabhu, Anna-Liisa, Ma, Kevin, Lee, Stephanie, Ally, Adrian, Tam, Angela, Sa, Danne, Rogers, Sean, Charest, David, Stott, Jeff, Zuyderduyn, Scott, Varhol, Richard, Eaves, Connie, Jones, Steven, Holt, Robert, Hirst, Martin, Hoodless, Pamela A, Marra, Marco A
Published in Genome Research (01.01.2007)
Published in Genome Research (01.01.2007)
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Journal Article
LongSAGE profiling of nine human embryonic stem cell lines
Hirst, Martin, Delaney, Allen, Rogers, Sean A, Schnerch, Angelique, Persaud, Deryck R, O'Connor, Michael D, Zeng, Thomas, Moksa, Michelle, Fichter, Keith, Mah, Diana, Go, Anne, Morin, Ryan D, Baross, Agnes, Zhao, Yongjun, Khattra, Jaswinder, Prabhu, Anna-Liisa, Pandoh, Pawan, McDonald, Helen, Asano, Jennifer, Dhalla, Noreen, Ma, Kevin, Lee, Stephanie, Ally, Adrian, Chahal, Neil, Menzies, Stephanie, Siddiqui, Asim, Holt, Robert, Jones, Steven, Gerhard, Daniela S, Thomson, James A, Eaves, Connie J, Marra, Marco A
Published in Genome biology (14.06.2007)
Published in Genome biology (14.06.2007)
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Journal Article
An efficient strategy for large-scale high-throughput transposon-mediated sequencing of cDNA clones
Butterfield, Yaron S. N., Marra, Marco A., Asano, Jennifer K., Chan, Susanna Y., Guin, Ranabir, Krzywinski, Martin I., Lee, Soo Sen, MacDonald, Kim W. K., Mathewson, Carrie A., Olson, Teika E., Pandoh, Pawan K., Prabhu, Anna-Liisa, Schnerch, Angelique, Skalska, Ursula, Smailus, Duane E., Stott, Jeff M., Tsai, Miranda I., Yang, George S., Zuyderduyn, Scott D., Schein, Jacqueline E., Jones, Steven J. M.
Published in Nucleic acids research (01.06.2002)
Published in Nucleic acids research (01.06.2002)
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Journal Article
Oligonucleotide Microarray Analysis of Genomic Imbalance in Children with Mental Retardation
Friedman, J.M., Baross, Ágnes, Delaney, Allen D., Ally, Adrian, Arbour, Laura, Asano, Jennifer, Bailey, Dione K., Barber, Sarah, Birch, Patricia, Brown-John, Mabel, Cao, Manqiu, Chan, Susanna, Charest, David L., Farnoud, Noushin, Fernandes, Nicole, Flibotte, Stephane, Go, Anne, Gibson, William T., Holt, Robert A., Jones, Steven J.M., Kennedy, Giulia C., Krzywinski, Martin, Langlois, Sylvie, Li, Haiyan I., McGillivray, Barbara C., Nayar, Tarun, Pugh, Trevor J., Rajcan-Separovic, Evica, Schein, Jacqueline E., Schnerch, Angelique, Siddiqui, Asim, Van Allen, Margot I., Wilson, Gary, Yong, Siu-Li, Zahir, Farah, Eydoux, Patrice, Marra, Marco A.
Published in American journal of human genetics (01.09.2006)
Published in American journal of human genetics (01.09.2006)
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Journal Article
A physical map of the mouse genome
Bentley, David R, Gregory, Simon G, Sekhon, Mandeep, Schein, Jacqueline, Zhao, Shaying, Osoegawa, Kazutoyo, Scott, Carol E, Evans, Richard S, Burridge, Paul W, Cox, Tony V, Fox, Christopher A, Hutton, Richard D, Mullenger, Ian R, Phillips, Kimbly J, Smith, James, Stalker, Jim, Threadgold, Glen J, Birney, Ewan, Wylie, Kristine, Chinwalla, Asif, Wallis, John, Hillier, LaDeana, Carter, Jason, Gaige, Tony, Jaeger, Sara, Kremitzki, Colin, Layman, Dan, Maas, Jason, McGrane, Rebecca, Mead, Kelly, Walker, Rebecca, Jones, Steven, Smith, Michael, Asano, Jennifer, Bosdet, Ian, Chan, Susanna, Chittaranjan, Suganthi, Chiu, Readman, Fjell, Chris, Fuhrmann, Dan, Girn, Noreen, Gray, Catharine, Guin, Ran, Hsiao, Letticia, Krzywinski, Martin, Kutsche, Reta, Lee, Soo Sen, Mathewson, Carrie, McLeavy, Candice, Messervier, Steve, Ness, Steven, Pandoh, Pawan, Prabhu, Anna-Liisa, Saeedi, Parvaneh, Smailus, Duane, Spence, Lorraine, Stott, Jeff, Taylor, Sheryl, Terpstra, Wesley, Tsai, Miranda, Vardy, Jill, Wye, Natasja, Yang, George, Shatsman, Sofiya, Ayodeji, Bola, Geer, Keita, Tsegaye, Getahun, Shvartsbeyn, Alla, Gebregeorgis, Elizabeth, Krol, Margaret, Russell, Daniel, Overton, Larry, Malek, Joel A, Holmes, Mike, Heaney, Michael, Shetty, Jyoti, Feldblyum, Tamara, Nierman, William C, Catanese, Joseph J, Hubbard, Tim, Waterston, Robert H, Rogers, Jane, de Jong, Pieter J, Fraser, Claire M, Marra, Marco, McPherson, John D
Published in Nature (London) (15.08.2002)
Published in Nature (London) (15.08.2002)
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Journal Article
A Mouse Atlas of Gene Expression: Large-Scale Digital Gene-Expression Profiles from Precisely Defined Developing C57BL/6J Mouse Tissues and Cells
Asim S. Siddiqui, Khattra, Jaswinder, Allen D. Delaney, Yongjun Zhao, Caroline Astell, Jennifer Asano, Ryan Babakaiff, Barber, Sarah, Jaclyn Beland, Slavita Bohacec, Mabel Brown-John, Steve Chand, David Charest, Anita M. Charters, Rebecca Cullum, Noreen Dhalla, Ruth Featherstone, Gerhard, Daniela S., Brad Hoffman, Holt, Robert A., Juan Hou, Byron Y. -L. Kuo, Lisa L. C. Lee, Stephanie Lee, Derek Leung, Kevin Ma, Corey Matsuo, Mayo, Michael, McDonald, Helen, Anna-Iiisa Prabhu, Pawan Pandoh, Riggins, Gregory J., Teresa Ruiz de Algara, James L. Rupert, Duane Smailus, Jeff Stott, Miranda Tsai, Richard Varhol, Pavle Vrljicak, Wong, David, Mona K. Wu, Yuan-Yun Xie, George Yang, Ida Zhang, Hirst, Martin, Steven J. M. Jones, Helgason, Cheryl D., Simpson, Elizabeth M., Pamela A. Hoodless, Marra, Marco A., Waterston, Robert H.
Published in Proceedings of the National Academy of Sciences - PNAS (20.12.2005)
Published in Proceedings of the National Academy of Sciences - PNAS (20.12.2005)
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Journal Article
physical map of the highly heterozygous Populus genome: integration with the genome sequence and genetic map and analysis of haplotype variation
Kelleher, Colin T, Chiu, Readman, Shin, Heesun, Bosdet, Ian E, Krzywinski, Martin I, Fjell, Chris D, Wilkin, Jennifer, Yin, TongMing, DiFazio, Stephen P, Ali, Johar, Asano, Jennifer K, Chan, Susanna, Cloutier, Alison, Girn, Noreen, Leach, Stephen, Lee, Darlene, Mathewson, Carrie A, Olson, Teika, O'Connor, Katie, Prabhu, Anna-Liisa, Smailus, Duane E, Stott, Jeffery M, Tsai, Miranda, Wye, Natasja H, Yang, George S, Zhuang, Jun, Holt, Robert A, Putnam, Nicholas H, Vrebalov, Julia, Giovannoni, James J, Grimwood, Jane, Schmutz, Jeremy, Rokhsar, Daniel, Jones, Steven J.M, Marra, Marco A, Tuskan, Gerald A, Bohlmann, Jörg, Ellis, Brian E, Ritland, Kermit, Douglas, Carl J, Schein, Jacqueline E
Published in The Plant journal : for cell and molecular biology (01.06.2007)
Published in The Plant journal : for cell and molecular biology (01.06.2007)
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Journal Article
A Modified Polymerase Chain Reaction‐Long Serial Analysis of Gene Expression Protocol Identifies Novel Transcripts in Human CD34+ Bone Marrow Cells
Zhao, Yun, Raouf, Afshin, Kent, David, Khattra, Jaswinder, Delaney, Allen, Schnerch, Angelique, Asano, Jennifer, McDonald, Helen, Chan, Christina, Jones, Steven, Marra, Marco A., Eaves, Connie J.
Published in Stem cells (Dayton, Ohio) (01.07.2007)
Published in Stem cells (Dayton, Ohio) (01.07.2007)
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Journal Article
A Modified Polymerase Chain Reaction-Long Serial Analysis of Gene Expression Protocol Identifies Novel Transcripts in Human CD34 super(+) Bone Marrow Cells
Zhao, Yun, Raouf, Afshin, Kent, David, Khattra, Jaswinder, Delaney, Allen, Schnerch, Angelique, Asano, Jennifer, McDonald, Helen, Chan, Christina, Jones, Steven, Marra, Marco A, Eaves, Connie J
Published in Stem cells (Dayton, Ohio) (01.07.2007)
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Published in Stem cells (Dayton, Ohio) (01.07.2007)
Journal Article
Digital gene expression by tag sequencing on the illumina genome analyzer
Morrissy, Sorana, Zhao, Yongjun, Delaney, Allen, Asano, Jennifer, Dhalla, Noreen, Li, Irene, McDonald, Helen, Pandoh, Pawan, Prabhu, Anna-Liisa, Tam, Angela, Hirst, Martin, Marra, Marco
Published in Current protocols in human genetics (01.04.2010)
Published in Current protocols in human genetics (01.04.2010)
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Journal Article
The Genome Sequence of the SARS-Associated Coronavirus
Marra, Marco A., Steven J. M. Jones, Astell, Caroline R., Holt, Robert A., Brooks-Wilson, Angela, Yaron S. N. Butterfield, Khattra, Jaswinder, Asano, Jennifer K., Barber, Sarah A., Chan, Susanna Y., Cloutier, Alison, Coughlin, Shaun M., Freeman, Doug, Girn, Noreen, Griffith, Obi L., Leach, Stephen R., Mayo, Michael, McDonald, Helen, Montgomery, Stephen B., Pandoh, Pawan K., Petrescu, Anca S., Robertson, A. Gordon, Schein, Jacqueline E., Siddiqui, Asim, Smailus, Duane E., Stott, Jeff M., Yang, George S., Plummer, Francis, Andonov, Anton, Artsob, Harvey, Bastien, Nathalie, Bernard, Kathy, Booth, Timothy F., Bowness, Donnie, Czub, Martin, Drebot, Michael, Fernando, Lisa, Flick, Ramon, Garbutt, Michael, Gray, Michael, Grolla, Allen, Jones, Steven, Feldmann, Heinz, Meyers, Adrienne, Kabani, Amin, Li, Yan, Normand, Susan, Stroher, Ute, Tipples, Graham A., Tyler, Shaun, Vogrig, Robert, Ward, Diane, Watson, Brynn, Brunham, Robert C., Krajden, Mel, Petric, Martin, Skowronski, Danuta M., Upton, Chris, Roper, Rachel L.
Published in Science (American Association for the Advancement of Science) (30.05.2003)
Published in Science (American Association for the Advancement of Science) (30.05.2003)
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Journal Article
Integrated and sequence-ordered BAC- and YAC-based physical maps for the rat genome
Krzywinski, Martin, Wallis, John, Gösele, Claudia, Bosdet, Ian, Chiu, Readman, Graves, Tina, Hummel, Oliver, Layman, Dan, Mathewson, Carrie, Wye, Natasja, Zhu, Baoli, Albracht, Derek, Asano, Jennifer, Barber, Sarah, Brown-John, Mabel, Chan, Susanna, Chand, Steve, Cloutier, Alison, Davito, Jonathon, Fjell, Chris, Gaige, Tony, Ganten, Detlev, Girn, Noreen, Guggenheimer, Kurtis, Himmelbauer, Heinz, Kreitler, Thomas, Leach, Stephen, Lee, Darlene, Lehrach, Hans, Mayo, Michael, Mead, Kelly, Olson, Teika, Pandoh, Pawan, Prabhu, Anna-Liisa, Shin, Heesun, Tänzer, Simone, Thompson, Jason, Tsai, Miranda, Walker, Jason, Yang, George, Sekhon, Mandeep, Hillier, LaDeana, Zimdahl, Heike, Marziali, Andre, Osoegawa, Kazutoyo, Zhao, Shaying, Siddiqui, Asim, de Jong, Pieter J, Warren, Wes, Mardis, Elaine, McPherson, John D, Wilson, Richard, Hübner, Norbert, Jones, Steven, Marra, Marco, Schein, Jacqueline
Published in Genome research (01.04.2004)
Published in Genome research (01.04.2004)
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Journal Article
P-127 Transcriptome profiling technologies at the British Columbia Cancer Agency
Khattra, Jaswinder, Chan, Susanna, Asano, Jennifer, Pandoh, Pawan, Coughlin, Shaun, McDonald, Helen, Girn, Noreen, Jones, Steven, Marra, Marco
Published in Lung cancer (Amsterdam, Netherlands) (01.08.2003)
Published in Lung cancer (Amsterdam, Netherlands) (01.08.2003)
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Journal Article
Tag‐Seq: Next‐Generation Tag Sequencing for Gene Expression Profiling
Morrissy, Sorana, Zhao, Yongjun, Delaney, Allen, Asano, Jennifer, Dhalla, Noreen, Li, Irene, McDonald, Helen, Pandoh, Pawan, Prabhu, Anna‐Liisa, Tam, Angela, Hirst, Martin, Marra, Marco
Published in Tag‐Based Next Generation Sequencing (14.12.2011)
Published in Tag‐Based Next Generation Sequencing (14.12.2011)
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