Combinatorial single-cell CRISPR screens by direct guide RNA capture and targeted sequencing
Replogle, Joseph M., Norman, Thomas M., Xu, Albert, Hussmann, Jeffrey A., Chen, Jin, Cogan, J. Zachery, Meer, Elliott J., Terry, Jessica M., Riordan, Daniel P., Srinivas, Niranjan, Fiddes, Ian T., Arthur, Joseph G., Alvarado, Luigi J., Pfeiffer, Katherine A., Mikkelsen, Tarjei S., Weissman, Jonathan S., Adamson, Britt
Published in Nature biotechnology (01.08.2020)
Published in Nature biotechnology (01.08.2020)
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A loss-of-function variant in ALOX15 protects against nasal polyps and chronic rhinosinusitis
Kristjansson, Ragnar P., Benonisdottir, Stefania, Davidsson, Olafur B., Oddsson, Asmundur, Tragante, Vinicius, Sigurdsson, Jon K., Stefansdottir, Lilja, Jonsson, Stefan, Jensson, Brynjar O., Arthur, Joseph G., Arnadottir, Gudny A., Sulem, Gerald, Halldorsson, Bjarni V., Gunnarsson, Bjarni, Halldorsson, Gisli H., Stefansson, Olafur A., Oskarsson, Gudjon R., Deaton, Aimee M., Olafsson, Isleifur, Eyjolfsson, Gudmundur I., Sigurdardottir, Olof, Onundarson, Pall T., Gislason, David, Gislason, Thorarinn, Ludviksson, Bjorn R., Ludviksdottir, Dora, Olafsdottir, Thorunn A., Rafnar, Thorunn, Masson, Gisli, Zink, Florian, Bjornsdottir, Gyda, Magnusson, Olafur Th, Bjornsdottir, Unnur S., Thorleifsson, Gudmar, Norddahl, Gudmundur L., Gudbjartsson, Daniel F., Thorsteinsdottir, Unnur, Jonsdottir, Ingileif, Sulem, Patrick, Stefansson, Kari
Published in Nature genetics (01.02.2019)
Published in Nature genetics (01.02.2019)
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Sc-compReg enables the comparison of gene regulatory networks between conditions using single-cell data
Duren, Zhana, Lu, Wenhui Sophia, Arthur, Joseph G., Shah, Preyas, Xin, Jingxue, Meschi, Francesca, Li, Miranda Lin, Nemec, Corey M., Yin, Yifeng, Wong, Wing Hung
Published in Nature communications (06.08.2021)
Published in Nature communications (06.08.2021)
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Comprehensive, integrated, and phased whole-genome analysis of the primary ENCODE cell line K562
Zhou, Bo, Ho, Steve S, Greer, Stephanie U, Zhu, Xiaowei, Bell, John M, Arthur, Joseph G, Spies, Noah, Zhang, Xianglong, Byeon, Seunggyu, Pattni, Reenal, Ben-Efraim, Noa, Haney, Michael S, Haraksingh, Rajini R, Song, Giltae, Ji, Hanlee P, Perrin, Dimitri, Wong, Wing H, Abyzov, Alexej, Urban, Alexander E
Published in Genome research (01.03.2019)
Published in Genome research (01.03.2019)
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Haplotype-resolved and integrated genome analysis of the cancer cell line HepG2
Zhou, Bo, Ho, Steve S, Greer, Stephanie U, Spies, Noah, Bell, John M, Zhang, Xianglong, Zhu, Xiaowei, Arthur, Joseph G, Byeon, Seunggyu, Pattni, Reenal, Saha, Ishan, Huang, Yiling, Song, Giltae, Perrin, Dimitri, Wong, Wing H, Ji, Hanlee P, Abyzov, Alexej, Urban, Alexander E
Published in Nucleic acids research (07.05.2019)
Published in Nucleic acids research (07.05.2019)
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Detection and analysis of complex structural variation in human genomes across populations and in brains of donors with psychiatric disorders
Zhou, Bo, Arthur, Joseph G., Guo, Hanmin, Kim, Taeyoung, Huang, Yiling, Pattni, Reenal, Wang, Tao, Kundu, Soumya, Luo, Jay X.J., Lee, HoJoon, Nachun, Daniel C., Purmann, Carolin, Monte, Emma M., Weimer, Annika K., Qu, Ping-Ping, Shi, Minyi, Jiang, Lixia, Yang, Xinqiong, Fullard, John F., Bendl, Jaroslav, Girdhar, Kiran, Kim, Minsu, Chen, Xi, Greenleaf, William J., Duncan, Laramie, Ji, Hanlee P., Zhu, Xiang, Song, Giltae, Montgomery, Stephen B., Palejev, Dean, zu Dohna, Heinrich, Roussos, Panos, Kundaje, Anshul, Hallmayer, Joachim F., Snyder, Michael P., Wong, Wing H., Urban, Alexander E.
Published in Cell (14.11.2024)
Published in Cell (14.11.2024)
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Journal Article
Sequence variants associating with urinary biomarkers
Benonisdottir, Stefania, Kristjansson, Ragnar P, Oddsson, Asmundur, Steinthorsdottir, Valgerdur, Mikaelsdottir, Evgenia, Kehr, Birte, Jensson, Brynjar O, Arnadottir, Gudny A, Sulem, Gerald, Sveinbjornsson, Gardar, Kristmundsdottir, Snaedis, Ivarsdottir, Erna V, Tragante, Vinicius, Gunnarsson, Bjarni, Runolfsdottir, Hrafnhildur Linnet, Arthur, Joseph G, Deaton, Aimee M, Eyjolfsson, Gudmundur I, Davidsson, Olafur B, Asselbergs, Folkert W, Hreidarsson, Astradur B, Rafnar, Thorunn, Thorleifsson, Gudmar, Edvardsson, Vidar, Sigurdsson, Gunnar, Helgadottir, Anna, Halldorsson, Bjarni V, Masson, Gisli, Holm, Hilma, Onundarson, Pall T, Indridason, Olafur S, Benediktsson, Rafn, Palsson, Runolfur, Gudbjartsson, Daniel F, Olafsson, Isleifur, Thorsteinsdottir, Unnur, Sulem, Patrick, Stefansson, Kari
Published in Human molecular genetics (01.04.2019)
Published in Human molecular genetics (01.04.2019)
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Stimulus features, resetting curves, and the dependence on adaptation
Arthur, Joseph G., Burton, Shawn D., Ermentrout, G. Bard
Published in Journal of computational neuroscience (01.06.2013)
Published in Journal of computational neuroscience (01.06.2013)
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Journal Article
Feasibility of parameter estimation in hepatitis C viral dynamics models
Arthur, Joseph G., Tran, Hien T., Aston, Philip
Published in Journal of inverse and ill-posed problems (01.02.2017)
Published in Journal of inverse and ill-posed problems (01.02.2017)
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Journal Article
Stimulus features, resetting curves, and the dependence on adaptation
Arthur, Joseph G., Burton, Shawn D., Ermentrout, G. Bard
Published in Journal of computational neuroscience (01.06.2013)
Published in Journal of computational neuroscience (01.06.2013)
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Journal Article
T18. DETECTION OF COMPLEX STRUCTURAL GENOME VARIANTS USING ARC-SV AND THEIR ENRICHMENT INSIDE GENES OF NEURODEVELOPMENTAL PATHWAYS
Hughes, Christopher, Zhou, Bo, Arthur, Joseph G., Kim, Taeyoung, Song, Giltae, Palejev, Dean, Wong, Wing H., Urban, Alexander E.
Published in European neuropsychopharmacology (01.10.2022)
Published in European neuropsychopharmacology (01.10.2022)
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Journal Article
Automatic detection of complex structural genome variation across world populations
Zhou, Bo, Arthur, Joseph G, Guo, Hanmin, Hughes, Christopher R, Kim, Taeyoung, Huang, Yiling, Pattni, Reenal, Lee, Hojoon, Ji, Hanlee P, Song, Giltae, Palejev, Dean, Zhu, Xiang, Wong, Wing H, Urban, Alexander E
Published in bioRxiv (02.02.2023)
Published in bioRxiv (02.02.2023)
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Paper
Haplotype-resolved and integrated genome analysis of the cancer cell line HepG2
Zhou, Bo, Ho, Steve S, Greer, Stephanie U, Spies, Noah, Bell, John M, Zhang, Xianglong, Zhu, Xiaowei, Arthur, Joseph G, Byeon, Seunggyu, Pattni, Reenal, Saha, Ishan, Huang, Yiling, Song, Giltae, Ji, Hanlee P, Perrin, Dimitri, Wong, Wing H, Abyzov, Alexej, Urban, Alexander E
Published in bioRxiv (08.11.2018)
Published in bioRxiv (08.11.2018)
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Paper
Comprehensive, integrated, and phased whole-genome analysis of the primary ENCODE cell line K562
Zhou, Bo, Ho, Steve S, Greer, Stephanie U, Zhu, Xiaowei, Bell, John M, Arthur, Joseph G, Spies, Noah, Zhang, Xianglong, Byeon, Seunggyu, Pattni, Reenal, Ben-Efraim, Noa, Haney, Michael S, Haraksingh, Rajini R, Ji, Hanlee P, Song, Giltae, Perrin, Dimitri, Wong, Wing H, Abyzov, Alexej, Urban, Alexander E
Published in bioRxiv (17.06.2018)
Published in bioRxiv (17.06.2018)
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