Bioinformatic pipelines combining denoising and clustering tools allow for more comprehensive prokaryotic and eukaryotic metabarcoding
Brandt, Miriam I., Trouche, Blandine, Quintric, Laure, Günther, Babett, Wincker, Patrick, Poulain, Julie, Arnaud‐Haond, Sophie
Published in Molecular ecology resources (01.08.2021)
Published in Molecular ecology resources (01.08.2021)
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Journal Article
Species are hypotheses: avoid connectivity assessments based on pillars of sand
Pante, Eric, Puillandre, Nicolas, Viricel, Amélia, Arnaud-Haond, Sophie, Aurelle, Didier, Castelin, Magalie, Chenuil, Anne, Destombe, Christophe, Forcioli, Didier, Valero, Myriam, Viard, Frédérique, Samadi, Sarah
Published in Molecular ecology (01.02.2015)
Published in Molecular ecology (01.02.2015)
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Journal Article
Using neutral, selected, and hitchhiker loci to assess connectivity of marine populations in the genomic era
Gagnaire, Pierre‐Alexandre, Broquet, Thomas, Aurelle, Didier, Viard, Frédérique, Souissi, Ahmed, Bonhomme, François, Arnaud‐Haond, Sophie, Bierne, Nicolas
Published in Evolutionary applications (01.09.2015)
Published in Evolutionary applications (01.09.2015)
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Journal Article
Microbial community structure in hadal sediments: high similarity along trench axes and strong changes along redox gradients
Schauberger, Clemens, Glud, Ronnie N., Hausmann, Bela, Trouche, Blandine, Maignien, Lois, Poulain, Julie, Wincker, Patrick, Arnaud-Haond, Sophie, Wenzhöfer, Frank, Thamdrup, Bo
Published in The ISME Journal (01.12.2021)
Published in The ISME Journal (01.12.2021)
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Journal Article
Feces DNA analyses track the rehabilitation of a free-ranging beluga whale
Günther, Babett, Jourdain, Eve, Rubincam, Lindsay, Karoliussen, Richard, Cox, Sam L., Arnaud Haond, Sophie
Published in Scientific reports (19.04.2022)
Published in Scientific reports (19.04.2022)
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Journal Article
Unraveling the Complexity of the Ne/Nc Ratio for Conservation of Large and Widespread Pelagic Fish Species: Current Status and Challenges
Delord, Chrystelle, Arnaud‐Haond, Sophie, Leone, Agostino, Rolland, Jonathan, Nikolic, Natacha
Published in Evolutionary applications (01.10.2024)
Published in Evolutionary applications (01.10.2024)
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Journal Article
Linking basin‐scale connectivity, oceanography and population dynamics for the conservation and management of marine ecosystems
Dubois, Mélodie, Rossi, Vincent, Ser‐Giacomi, Enrico, Arnaud‐Haond, Sophie, López, Cristóbal, Hernández‐García, Emilio
Published in Global ecology and biogeography (01.05.2016)
Published in Global ecology and biogeography (01.05.2016)
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Journal Article
Large‐scale genetic panmixia in the blue shark (Prionace glauca): A single worldwide population, or a genetic lag‐time effect of the “grey zone” of differentiation?
Bailleul, Diane, Mackenzie, Alicia, Sacchi, Olivier, Poisson, François, Bierne, Nicolas, Arnaud‐Haond, Sophie
Published in Evolutionary applications (01.06.2018)
Published in Evolutionary applications (01.06.2018)
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Journal Article
Capture by hybridization for full‐length barcode‐based eukaryotic and prokaryotic biodiversity inventories of deep sea ecosystems
Günther, Babett, Marre, Sophie, Defois, Clémence, Merzi, Thomas, Blanc, Philippe, Peyret, Pierre, Arnaud‐Haond, Sophie
Published in Molecular ecology resources (01.02.2022)
Published in Molecular ecology resources (01.02.2022)
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Journal Article
Stepping up to genome scan allows stock differentiation in the worldwide distributed blue shark Prionace glauca
Nikolic, Natacha, Devloo‐Delva, Floriaan, Bailleul, Diane, Noskova, Ekaterina, Rougeux, Clément, Delord, Chrystelle, Borsa, Philippe, Liautard‐Haag, Cathy, Hassan, Mohamad, Marie, Amandine D., Feutry, Pierre, Grewe, Peter, Davies, Campbell, Farley, Jessica, Fernando, Daniel, Biton‐Porsmoguer, Sebastian, Poisson, François, Parker, Denham, Leone, Agostino, Aulich, Jorden, Lansdell, Matt, Marsac, Francis, Arnaud‐Haond, Sophie
Published in Molecular ecology (01.03.2023)
Published in Molecular ecology (01.03.2023)
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Journal Article
Subtle limits to connectivity revealed by outlier loci within two divergent metapopulations of the deep‐sea hydrothermal gastropod Ifremeria nautilei
Tran Lu Y, Adrien, Ruault, Stéphanie, Daguin‐Thiébaut, Claire, Castel, Jade, Bierne, Nicolas, Broquet, Thomas, Wincker, Patrick, Perdereau, Aude, Arnaud‐Haond, Sophie, Gagnaire, Pierre‐Alexandre, Jollivet, Didier, Hourdez, Stéphane, Bonhomme, François
Published in Molecular ecology (01.05.2022)
Published in Molecular ecology (01.05.2022)
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Journal Article
Evaluating sediment and water sampling methods for the estimation of deep-sea biodiversity using environmental DNA
Brandt, Miriam I., Pradillon, Florence, Trouche, Blandine, Henry, Nicolas, Liautard-Haag, Cathy, Cambon-Bonavita, Marie-Anne, Cueff-Gauchard, Valérie, Wincker, Patrick, Belser, Caroline, Poulain, Julie, Arnaud-Haond, Sophie, Zeppilli, Daniela
Published in Scientific reports (12.04.2021)
Published in Scientific reports (12.04.2021)
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Journal Article
Unidirectional trans‐Atlantic gene flow and a mixed spawning area shape the genetic connectivity of Atlantic bluefin tuna
Díaz‐Arce, Natalia, Gagnaire, Pierre‐Alexandre, Richardson, David E., Walter, John F., Arnaud‐Haond, Sophie, Fromentin, Jean‐Marc, Brophy, Deirdre, Lutcavage, Molly, Addis, Piero, Alemany, Francisco, Allman, Robert, Deguara, Simeon, Fraile, Igaratza, Goñi, Nicolas, Hanke, Alex R., Karakulak, F. Saadet, Pacicco, Ashley, Quattro, Joseph M., Rooker, Jay R., Arrizabalaga, Haritz, Rodríguez‐Ezpeleta, Naiara
Published in Molecular ecology (01.01.2024)
Published in Molecular ecology (01.01.2024)
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Journal Article
Parallel pattern of differentiation at a genomic island shared between clinal and mosaic hybrid zones in a complex of cryptic seahorse lineages
Riquet, Florentine, Liautard-Haag, Cathy, Woodall, Lucy, Bouza, Carmen, Louisy, Patrick, Hamer, Bojan, Otero-Ferrer, Francisco, Aublanc, Philippe, Béduneau, Vickie, Briard, Olivier, El Ayari, Tahani, Hochscheid, Sandra, Belkhir, Khalid, Arnaud-Haond, Sophie, Gagnaire, Pierre-Alexandre, Bierne, Nicolas
Published in Evolution (01.04.2019)
Published in Evolution (01.04.2019)
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Journal Article
Out of the Mediterranean? Post‐glacial colonization pathways varied among cold‐water coral species
Boavida, Joana, Becheler, Ronan, Choquet, Marvin, Frank, Norbert, Taviani, Marco, Bourillet, Jean‐François, Meistertzheim, Anne‐Leila, Grehan, Anthony, Savini, Alessandra, Arnaud‐Haond, Sophie
Published in Journal of biogeography (01.05.2019)
Published in Journal of biogeography (01.05.2019)
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Journal Article
On the specific status of eastern Mediterranean Dendrophyllia corals (Cnidaria, Anthozoa): Genetic characterization and speciation scenarios
Aurelle, Didier, Haguenauer, Anne, Blaise, Chloé, Reynes, Lauric, Arnaud‐Haond, Sophie, Boavida, Joana, Cabau, Cédric, Klopp, Christophe, Lundalv, Tomas, Noûs, Camille, Sartoretto, Stéphane, Wienberg, Claudia, Jiménez, Carlos E., Orejas, Covadonga
Published in Zoologica scripta (01.03.2024)
Published in Zoologica scripta (01.03.2024)
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Journal Article
Vicariance patterns in the Mediterranean Sea: east-west cleavage and low dispersal in the endemic seagrass Posidonia oceanica
Arnaud-Haond, Sophie, Migliaccio, Marianna, Diaz-Almela, Elena, Teixeira, Sara, van de Vliet, Mirjiam Susanne, Alberto, Filipe, Procaccini, Gabriele, Duarte, Carlos M, Serrão, Ester A
Published in Journal of biogeography (01.06.2007)
Published in Journal of biogeography (01.06.2007)
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Journal Article