SpotClean adjusts for spot swapping in spatial transcriptomics data
Ni, Zijian, Prasad, Aman, Chen, Shuyang, Halberg, Richard B., Arkin, Lisa M., Drolet, Beth A., Newton, Michael A., Kendziorski, Christina
Published in Nature communications (27.05.2022)
Published in Nature communications (27.05.2022)
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Journal Article
RegPrecise: a database of curated genomic inferences of transcriptional regulatory interactions in prokaryotes
Novichkov, Pavel S, Laikova, Olga N, Novichkova, Elena S, Gelfand, Mikhail S, Arkin, Adam P, Dubchak, Inna, Rodionov, Dmitry A
Published in Nucleic acids research (01.01.2010)
Published in Nucleic acids research (01.01.2010)
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Journal Article
Selective carbon sources influence the end products of microbial nitrate respiration
Carlson, Hans K., Lui, Lauren M., Price, Morgan N., Kazakov, Alexey E., Carr, Alex V., Kuehl, Jennifer V., Owens, Trenton K., Nielsen, Torben, Arkin, Adam P., Deutschbauer, Adam M.
Published in The ISME Journal (01.08.2020)
Published in The ISME Journal (01.08.2020)
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Journal Article
Selection of chromosomal DNA libraries using a multiplex CRISPR system
Ryan, Owen W, Skerker, Jeffrey M, Maurer, Matthew J, Li, Xin, Tsai, Jordan C, Poddar, Snigdha, Lee, Michael E, DeLoache, Will, Dueber, John E, Arkin, Adam P, Cate, Jamie H D
Published in eLife (19.08.2014)
Published in eLife (19.08.2014)
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A first‐in‐human study of the safety, tolerability, pharmacokinetics and pharmacodynamics of PF‐06741086, an anti‐tissue factor pathway inhibitor mAb, in healthy volunteers
Cardinal, M., Kantaridis, C., Zhu, T., Sun, P., Pittman, D. D., Murphy, J. E., Arkin, S.
Published in Journal of thrombosis and haemostasis (01.09.2018)
Published in Journal of thrombosis and haemostasis (01.09.2018)
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Journal Article
Control of stochastic gene expression by host factors at the HIV promoter
Burnett, John C, Miller-Jensen, Kathryn, Shah, Priya S, Arkin, Adam P, Schaffer, David V
Published in PLoS pathogens (01.01.2009)
Published in PLoS pathogens (01.01.2009)
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Journal Article
Measurement and modeling of intrinsic transcription terminators
Cambray, Guillaume, Guimaraes, Joao C, Mutalik, Vivek K, Lam, Colin, Mai, Quynh-Anh, Thimmaiah, Tim, Carothers, James M, Arkin, Adam P, Endy, Drew
Published in Nucleic acids research (01.05.2013)
Published in Nucleic acids research (01.05.2013)
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Journal Article
Pharmacological brake-release of mRNA translation enhances cognitive memory
Sidrauski, Carmela, Acosta-Alvear, Diego, Khoutorsky, Arkady, Vedantham, Punitha, Hearn, Brian R, Li, Han, Gamache, Karine, Gallagher, Ciara M, Ang, Kenny K-H, Wilson, Chris, Okreglak, Voytek, Ashkenazi, Avi, Hann, Byron, Nader, Karim, Arkin, Michelle R, Renslo, Adam R, Sonenberg, Nahum, Walter, Peter
Published in eLife (28.05.2013)
Published in eLife (28.05.2013)
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Journal Article
LC3B Binds to the Autophagy Protease ATG4b with High Affinity Using a Bipartite Interface
Tang, Yinyan, Kay, Amber, Jiang, Ziwen, Arkin, Michelle R.
Published in Biochemistry (Easton) (01.11.2022)
Published in Biochemistry (Easton) (01.11.2022)
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Journal Article
Evidence-based annotation of gene function in Shewanella oneidensis MR-1 using genome-wide fitness profiling across 121 conditions
Deutschbauer, Adam, Price, Morgan N, Wetmore, Kelly M, Shao, Wenjun, Baumohl, Jason K, Xu, Zhuchen, Nguyen, Michelle, Tamse, Raquel, Davis, Ronald W, Arkin, Adam P
Published in PLoS genetics (01.11.2011)
Published in PLoS genetics (01.11.2011)
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Journal Article
Mutant phenotypes for thousands of bacterial genes of unknown function
Price, Morgan N., Wetmore, Kelly M., Waters, R. Jordan, Callaghan, Mark, Ray, Jayashree, Liu, Hualan, Kuehl, Jennifer V., Melnyk, Ryan A., Lamson, Jacob S., Suh, Yumi, Carlson, Hans K., Esquivel, Zuelma, Sadeeshkumar, Harini, Chakraborty, Romy, Zane, Grant M., Rubin, Benjamin E., Wall, Judy D., Visel, Axel, Bristow, James, Blow, Matthew J., Arkin, Adam P., Deutschbauer, Adam M.
Published in Nature (London) (01.05.2018)
Published in Nature (London) (01.05.2018)
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