Tumor-associated macrophage heterogeneity is driven by tissue territories in breast cancer
Laviron, Marie, Petit, Maxime, Weber-Delacroix, Eléonore, Combes, Alexis J., Arkal, Arjun Rao, Barthélémy, Sandrine, Courau, Tristan, Hume, David A., Combadière, Christophe, Krummel, Matthew F., Boissonnas, Alexandre
Published in Cell reports (Cambridge) (24.05.2022)
Published in Cell reports (Cambridge) (24.05.2022)
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Increased risk of severe clinical course of COVID-19 in carriers of HLA-C04:01
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Published in EClinicalMedicine (01.10.2021)
Published in EClinicalMedicine (01.10.2021)
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Bioinformatics Analysis of Publicly Available Single-Nuclei Transcriptomics Alzheimer's Disease Datasets Reveals APOE Genotype-Specific Changes Across Cell Types in Two Brain Regions
Belonwu, Stella A, Li, Yaqiao, Bunis, Daniel G, Rao, Arjun Arkal, Solsberg, Caroline Warly, Oskotsky, Tomiko, Taubes, Alice L, Grone, Brian, Zalocusky, Kelly A, Fragiadakis, Gabriela K, Huang, Yadong, Sirota, Marina
Published in Frontiers in aging neuroscience (27.04.2022)
Published in Frontiers in aging neuroscience (27.04.2022)
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Kersten, Kelly, Hu, Kenneth H., Combes, Alexis J., Samad, Bushra, Harwin, Tory, Ray, Arja, Rao, Arjun Arkal, Cai, En, Marchuk, Kyle, Artichoker, Jordan, Courau, Tristan, Shi, Quanming, Belk, Julia, Satpathy, Ansuman T., Krummel, Matthew F.
Published in Cancer cell (13.06.2022)
Published in Cancer cell (13.06.2022)
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Published in Nature biotechnology (01.04.2017)
Published in Nature biotechnology (01.04.2017)
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Sex-Stratified Single-Cell RNA-Seq Analysis Identifies Sex-Specific and Cell Type-Specific Transcriptional Responses in Alzheimer’s Disease Across Two Brain Regions
Belonwu, Stella A., Li, Yaqiao, Bunis, Daniel, Rao, Arjun Arkal, Solsberg, Caroline Warly, Tang, Alice, Fragiadakis, Gabriela K., Dubal, Dena B., Oskotsky, Tomiko, Sirota, Marina
Published in Molecular neurobiology (01.01.2022)
Published in Molecular neurobiology (01.01.2022)
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Tumor-associated macrophage heterogeneity is driven by tissue territories in breast cancer
Laviron, Marie, Petit, Maxime, Weber-Delacroix, Eléonore, Combes, Alexis J, Arkal, Arjun Rao, Barthélémy, Sandrine, Courau, Tristan, Hume, David A, Combadière, Christophe, Krummel, Matthew F, Boissonnas, Alexandre
Published in Cell reports (Cambridge) (24.05.2022)
Published in Cell reports (Cambridge) (24.05.2022)
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SARS-CoV-2 infection of airway organoids reveals conserved use of Tetraspanin-8 by Ancestral, Delta, and Omicron variants
Hysenaj, Lisiena, Little, Samantha, Kulhanek, Kayla, Magnen, Melia, Bahl, Kriti, Gbenedio, Oghenekevwe M., Prinz, Morgan, Rodriguez, Lauren, Andersen, Christopher, Rao, Arjun Arkal, Shen, Alan, Lone, Jean-Christophe, Lupin-Jimenez, Leonard C., Bonser, Luke R., Serwas, Nina K., Mick, Eran, Khalid, Mir M., Taha, Taha Y., Kumar, Renuka, Li, Jack Z., Ding, Vivianne W., Matsumoto, Shotaro, Maishan, Mazharul, Sreekumar, Bharath, Simoneau, Camille, Nazarenko, Irina, Tomlinson, Michael G., Khan, Khajida, von Gottberg, Anne, Sigal, Alex, Looney, Mark R., Fragiadakis, Gabriela K., Jablons, David M., Langelier, Charles R., Matthay, Michael, Krummel, Matthew, Erle, David J., Combes, Alexis J., Sil, Anita, Ott, Melanie, Kratz, Johannes R., Roose, Jeroen P.
Published in Stem cell reports (14.03.2023)
Published in Stem cell reports (14.03.2023)
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Global Absence and Targeting of Protective Immune States in Severe COVID-19
Combes, Alexis J, Courau, Tristan, Kuhn, Nicholas F, Hu, Kenneth H, Ray, Arja, Chen, William S, Cleary, Simon J, Chew, Nayvin W, Kushnoor, Divyashree, Reeder, Gabriella C, Shen, Alan, Tsui, Jessica, Hiam-Galvez, Kamir J, Muñoz-Sandoval, Priscila, Zhu, Wandi S, Lee, David S, Sun, Yang, You, Ran, Magnen, Mélia, Rodriguez, Lauren, Leligdowicz, Aleksandra, Zamecnik, Colin R, Loudermilk, Rita P, Wilson, Michael R, Ye, Chun J, Fragiadakis, Gabriela K, Looney, Mark R, Chan, Vincent, Ward, Alyssa, Carrillo, Sidney, Matthay, Michael, Erle, David J, Woodruff, Prescott G, Langelier, Charles, Kangelaris, Kirsten, Hendrickson, Carolyn M, Calfee, Carolyn, Rao, Arjun Arkal, Krummel, Matthew F
Published in bioRxiv (29.10.2020)
Published in bioRxiv (29.10.2020)
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Global Absence and Targeting of Protective Immune States in Severe COVID-19
Combes, Alexis J, Courau, Tristan, Kuhn, Nicholas F, Hu, Kenneth H, Ray, Arja, Chen, William S, Cleary, Simon J, Chew, Nayvin W, Kushnoor, Divyashree, Reeder, Gabriella C, Shen, Alan, Tsui, Jessica, Hiam-Galvez, Kamir J, Muñoz-Sandoval, Priscila, Zhu, Wandi S, Lee, David S, Sun, Yang, You, Ran, Magnen, Mélia, Rodriguez, Lauren, Leligdowicz, Aleksandra, Zamecnik, Colin R, Loudermilk, Rita P, Wilson, Michael R, Ye, Chun J, Fragiadakis, Gabriela K, Looney, Mark R, Chan, Vincent, Ward, Alyssa, Carrillo, Sidney, Matthay, Michael, Erle, David J, Woodruff, Prescott G, Langelier, Charles, Kangelaris, Kirsten, Hendrickson, Carolyn M, Calfee, Carolyn, Rao, Arjun Arkal, Krummel, Matthew F
Published in Research square (28.10.2020)
Published in Research square (28.10.2020)
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Longitudinal single-cell epitope and RNA-sequencing reveals the immunological impact of type 1 interferon autoantibodies in critical COVID-19: Anti-IFN antibodies in critical COVID-19 correlate with poor ISG response and upregulation of LAIR1 surface protein in PBMCs
van der Wijst, Monique G P, Vazquez, Sara E, Hartoularos, George C, Bastard, Paul, Grant, Tianna, Bueno, Raymund, Lee, David S, Greenland, John R, Sun, Yang, Perez, Richard, Ogorodnikov, Anton, Ward, Alyssa, Mann, Sabrina A, Lynch, Kara L, Yun, Cassandra, Havlir, Diane V, Chamie, Gabriel, Marquez, Carina, Greenhouse, Bryan, Lionakis, Michail S, Norris, Philip J, Dumont, Larry J, Kelly, Kathleen, Zhang, Peng, Zhang, Qian, Gervais, Adrian, Le Voyer, Tom, Whatley, Alexander, Si, Yichen, Byrne, Ashley, Combes, Alexis J, Rao, Arjun Arkal, Song, Yun S, Fragiadakis, Gabriela K, Kangelaris, Kirsten, Calfee, Carolyn S, Erle, David J, Hendrickson, Carolyn, Krummel, Matthew F, Woodruff, Prescott G, Langelier, Charles R, Casanova, Jean-Laurent, Derisi, Joseph L, Anderson, Mark S, Ye, Chun Jimmie
Published in bioRxiv (10.03.2021)
Published in bioRxiv (10.03.2021)
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Spatiotemporal co-dependency between macrophages and exhausted CD8+ T cells in cancer
Kersten, Kelly, Hu, Kenneth H, Combes, Alexis J, Samad, Bushra, Harwin, Tory, Ray, Arja, Rao, Arjun Arkal, Cai, En, Marchuk, Kyle, Jordan Artichoker, Courau, Tristan, Shi, Quanming, Belk, Julia, Satpathy, Ansuman T, Krummel, Matthew F
Published in bioRxiv (28.09.2021)
Published in bioRxiv (28.09.2021)
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A Pan-Cancer Census of Dominant Tumor Immune Archetypes
Combes, Alexis J, Samad, Bushra, Tsui, Jessica, Chew, Nayvin W, Yan, Peter, Reeder, Gabriella C, Kushnoor, Divyashree, Shen, Alan, Davidson, Brittany, Barczac, Andrea J, Adkisson, Michael, Edwards, Austin, Naser, Mohammad, Barry, Kevin C, Courau, Tristan, Hammoudi, Taymour, Arguello, Rafael J, Rao, Arjun Arkal, Olshen, Adam B, Consortium, Immunoprofiler, Cai, Cathy, Zhan, Jenny, Davis, Katelyn C, Kelley, Robin K, Chapman, Jocelyn S, Attreya, Chloe E, Patel, Amar, Daud, Adil I, Ha, Patrick, Diaz, Aaron, Kratz, Johannes R, Collisson, Eric A, Fragiadakis, Gabriella K, Erle, David J, Boissonnas, Alexandre, Asthana, Saurabh, Chan, Vincent, Krummel, Matthew F
Published in bioRxiv (27.04.2021)
Published in bioRxiv (27.04.2021)
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