Tandem repeats lead to sequence assembly errors and impose multi-level challenges for genome and protein databases
Tørresen, Ole K, Star, Bastiaan, Mier, Pablo, Andrade-Navarro, Miguel A, Bateman, Alex, Jarnot, Patryk, Gruca, Aleksandra, Grynberg, Marcin, Kajava, Andrey V, Promponas, Vasilis J, Anisimova, Maria, Jakobsen, Kjetill S, Linke, Dirk
Published in Nucleic acids research (02.12.2019)
Published in Nucleic acids research (02.12.2019)
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Journal Article
Progressive multiple sequence alignment with indel evolution
Maiolo, Massimo, Zhang, Xiaolei, Gil, Manuel, Anisimova, Maria
Published in BMC bioinformatics (21.09.2018)
Published in BMC bioinformatics (21.09.2018)
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Journal Article
Repertoire, unified nomenclature and evolution of the Type III effector gene set in the Ralstonia solanacearum species complex
Peeters, Nemo, Carrère, Sébastien, Anisimova, Maria, Plener, Laure, Cazalé, Anne-Claire, Genin, Stephane
Published in BMC genomics (06.12.2013)
Published in BMC genomics (06.12.2013)
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Journal Article
Morphometric, Behavioral, and Genomic Evidence for a New Orangutan Species
Nater, Alexander, Mattle-Greminger, Maja P., Nurcahyo, Anton, Nowak, Matthew G., de Manuel, Marc, Desai, Tariq, Groves, Colin, Pybus, Marc, Sonay, Tugce Bilgin, Roos, Christian, Lameira, Adriano R., Wich, Serge A., Askew, James, Davila-Ross, Marina, Fredriksson, Gabriella, de Valles, Guillem, Casals, Ferran, Prado-Martinez, Javier, Goossens, Benoit, Verschoor, Ernst J., Warren, Kristin S., Singleton, Ian, Marques, David A., Pamungkas, Joko, Perwitasari-Farajallah, Dyah, Rianti, Puji, Tuuga, Augustine, Gut, Ivo G., Gut, Marta, Orozco-terWengel, Pablo, van Schaik, Carel P., Bertranpetit, Jaume, Anisimova, Maria, Scally, Aylwyn, Marques-Bonet, Tomas, Meijaard, Erik, Krützen, Michael
Published in Current biology (20.11.2017)
Published in Current biology (20.11.2017)
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Journal Article
ProPIP: a tool for progressive multiple sequence alignment with Poisson Indel Process
Maiolo, Massimo, Gatti, Lorenzo, Frei, Diego, Leidi, Tiziano, Gil, Manuel, Anisimova, Maria
Published in BMC bioinformatics (24.10.2021)
Published in BMC bioinformatics (24.10.2021)
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Journal Article
Short tandem repeat mutations regulate gene expression in colorectal cancer
Verbiest, Max A, Lundström, Oxana, Xia, Feifei, Baudis, Michael, Bilgin Sonay, Tugce, Anisimova, Maria
Published in Scientific reports (09.02.2024)
Published in Scientific reports (09.02.2024)
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Journal Article
A New Census of Protein Tandem Repeats and Their Relationship with Intrinsic Disorder
Delucchi, Matteo, Schaper, Elke, Sachenkova, Oxana, Elofsson, Arne, Anisimova, Maria
Published in Genes (09.04.2020)
Published in Genes (09.04.2020)
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Journal Article
Querying knowledge graphs in natural language
Liang, Shiqi, Stockinger, Kurt, de Farias, Tarcisio Mendes, Anisimova, Maria, Gil, Manuel
Published in Journal of big data (01.01.2021)
Published in Journal of big data (01.01.2021)
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Journal Article
Cross-reactive immunity potentially drives global oscillation and opposed alternation patterns of seasonal influenza A viruses
Gatti, Lorenzo, Koenen, Mischa H, Zhang, Jitao David, Anisimova, Maria, Verhagen, Lilly M, Schutten, Martin, Osterhaus, Ab, van der Vries, Erhard
Published in Scientific reports (25.05.2022)
Published in Scientific reports (25.05.2022)
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Journal Article
Accounting for Programmed Ribosomal Frameshifting in the Computation of Codon Usage Bias Indices
Garcia, Victor, Zoller, Stefan, Anisimova, Maria
Published in G3 : genes - genomes - genetics (01.10.2018)
Published in G3 : genes - genomes - genetics (01.10.2018)
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