Efficiency of the CO₂-concentrating mechanism of diatoms
Hopkinson, Brian M, Dupont, Christopher L, Allen, Andrew E, Morel, François M.M
Published in Proceedings of the National Academy of Sciences - PNAS (08.03.2011)
Published in Proceedings of the National Academy of Sciences - PNAS (08.03.2011)
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Journal Article
Phytoplankton–bacterial interactions mediate micronutrient colimitation at the coastal Antarctic sea ice edge
Bertrand, Erin M., McCrow, John P., Moustafa, Ahmed, Zheng, Hong, McQuaid, Jeffrey B., Delmont, Tom O., Post, Anton F., Sipler, Rachel E., Spackeen, Jenna L., Xu, Kai, Bronk, Deborah A., Hutchins, David A., Allen, Andrew E.
Published in Proceedings of the National Academy of Sciences - PNAS (11.08.2015)
Published in Proceedings of the National Academy of Sciences - PNAS (11.08.2015)
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Journal Article
Evolution and metabolic significance of the urea cycle in photosynthetic diatoms
Allen, Andrew E., Dupont, Christopher L., Oborník, Miroslav, Horák, Aleš, Nunes-Nesi, Adriano, McCrow, John P., Zheng, Hong, Johnson, Daniel A., Hu, Hanhua, Fernie, Alisdair R., Bowler, Chris
Published in Nature (London) (12.05.2011)
Published in Nature (London) (12.05.2011)
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Journal Article
Transcriptional Orchestration of the Global Cellular Response of a Model Pennate Diatom to Diel Light Cycling under Iron Limitation
Smith, Sarah R, Gillard, Jeroen T F, Kustka, Adam B, McCrow, John P, Badger, Jonathan H, Zheng, Hong, New, Ashley M, Dupont, Chris L, Obata, Toshihiro, Fernie, Alisdair R, Allen, Andrew E
Published in PLoS genetics (01.12.2016)
Published in PLoS genetics (01.12.2016)
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Journal Article
Probing the evolution, ecology and physiology of marine protists using transcriptomics
Caron, David A., Alexander, Harriet, Allen, Andrew E., Archibald, John M., Armbrust, E. Virginia, Bachy, Charles, Bell, Callum J., Bharti, Arvind, Dyhrman, Sonya T., Guida, Stephanie M., Heidelberg, Karla B., Kaye, Jonathan Z., Metzner, Julia, Smith, Sarah R., Worden, Alexandra Z.
Published in Nature reviews. Microbiology (01.01.2017)
Published in Nature reviews. Microbiology (01.01.2017)
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Journal Article
Manganese and iron deficiency in Southern Ocean Phaeocystis antarctica populations revealed through taxon-specific protein indicators
Wu, Miao, McCain, J. Scott P., Rowland, Elden, Middag, Rob, Sandgren, Mats, Allen, Andrew E., Bertrand, Erin M.
Published in Nature communications (08.08.2019)
Published in Nature communications (08.08.2019)
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Journal Article
Biosynthesis of the neurotoxin domoic acid in a bloom-forming diatom
Brunson, John K, McKinnie, Shaun M K, Chekan, Jonathan R, McCrow, John P, Miles, Zachary D, Bertrand, Erin M, Bielinski, Vincent A, Luhavaya, Hanna, Oborník, Miroslav, Smith, G Jason, Hutchins, David A, Allen, Andrew E, Moore, Bradley S
Published in Science (American Association for the Advancement of Science) (28.09.2018)
Published in Science (American Association for the Advancement of Science) (28.09.2018)
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Journal Article
Evolution and regulation of nitrogen flux through compartmentalized metabolic networks in a marine diatom
Smith, Sarah R., Dupont, Chris L., McCarthy, James K., Broddrick, Jared T., Oborník, Miroslav, Horák, Aleš, Füssy, Zoltán, Cihlář, Jaromír, Kleessen, Sabrina, Zheng, Hong, McCrow, John P., Hixson, Kim K., Araújo, Wagner L., Nunes-Nesi, Adriano, Fernie, Alisdair, Nikoloski, Zoran, Palsson, Bernhard O., Allen, Andrew E.
Published in Nature communications (07.10.2019)
Published in Nature communications (07.10.2019)
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Journal Article
A Novel Protein, Ubiquitous in Marine Phytoplankton, Concentrates Iron at the Cell Surface and Facilitates Uptake
Morrissey, Joe, Sutak, Robert, Paz-Yepes, Javier, Tanaka, Atsuko, Moustafa, Ahmed, Veluchamy, Alaguraj, Thomas, Yann, Botebol, Hugo, Bouget, François-Yves, McQuaid, Jeffrey B., Tirichine, Leila, Allen, Andrew E., Lesuisse, Emmanuel, Bowler, Chris
Published in Current biology (02.02.2015)
Published in Current biology (02.02.2015)
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Journal Article
Comparative metatranscriptomics identifies molecular bases for the physiological responses of phytoplankton to varying iron availability
Marchetti, Adrian, Schruth, David M, Durkin, Colleen A, Parker, Micaela S, Kodner, Robin B, Berthiaume, Chris T, Morales, Rhonda, Allen, Andrew E, Armbrust, E. Virginia
Published in Proceedings of the National Academy of Sciences - PNAS (07.02.2012)
Published in Proceedings of the National Academy of Sciences - PNAS (07.02.2012)
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Journal Article
Nitrate Reductase Knockout Uncouples Nitrate Transport from Nitrate Assimilation and Drives Repartitioning of Carbon Flux in a Model Pennate Diatom
McCarthy, James K., Smith, Sarah R., McCrow, John P., Tan, Maxine, Zheng, Hong, Beeri, Karen, Roth, Robyn, Lichtle, Christian, Goodenough, Ursula, Bowler, Chris P., Dupont, Christopher L., Allen, Andrew E.
Published in The Plant cell (01.08.2017)
Published in The Plant cell (01.08.2017)
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Journal Article
Designer diatom episomes delivered by bacterial conjugation
Karas, Bogumil J., Diner, Rachel E., Lefebvre, Stephane C., McQuaid, Jeff, Phillips, Alex P.R., Noddings, Chari M., Brunson, John K., Valas, Ruben E., Deerinck, Thomas J., Jablanovic, Jelena, Gillard, Jeroen T.F., Beeri, Karen, Ellisman, Mark H., Glass, John I., Hutchison III, Clyde A., Smith, Hamilton O., Venter, J. Craig, Allen, Andrew E., Dupont, Christopher L., Weyman, Philip D.
Published in Nature communications (21.04.2015)
Published in Nature communications (21.04.2015)
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Journal Article
Genome-Scale Model Reveals Metabolic Basis of Biomass Partitioning in a Model Diatom
Levering, Jennifer, Broddrick, Jared, Dupont, Christopher L, Peers, Graham, Beeri, Karen, Mayers, Joshua, Gallina, Alessandra A, Allen, Andrew E, Palsson, Bernhard O, Zengler, Karsten
Published in PloS one (06.05.2016)
Published in PloS one (06.05.2016)
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Journal Article
Host and Water Microbiota Are Differentially Linked to Potential Human Pathogen Accumulation in Oysters
Diner, Rachel E, Zimmer-Faust, Amy, Cooksey, Emily, Allard, Sarah, Kodera, Sho M, Kunselman, Emily, Garodia, Yash, Verhougstraete, Marc P, Allen, Andrew E, Griffith, John, Gilbert, Jack A
Published in Applied and environmental microbiology (26.07.2023)
Published in Applied and environmental microbiology (26.07.2023)
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Journal Article
Influence of nutrient supply on plankton microbiome biodiversity and distribution in a coastal upwelling region
James, Chase C., Barton, Andrew D., Allen, Lisa Zeigler, Lampe, Robert H., Rabines, Ariel, Schulberg, Anne, Zheng, Hong, Goericke, Ralf, Goodwin, Kelly D., Allen, Andrew E.
Published in Nature communications (04.05.2022)
Published in Nature communications (04.05.2022)
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Journal Article
Whole-cell response of the pennate diatom Phaeodactylum tricornutum to iron starvation
Allen, Andrew E, LaRoche, Julie, Maheswari, Uma, Lommer, Markus, Schauer, Nicolas, Lopez, Pascal J, Finazzi, Giovanni, Fernie, Alisdair R, Bowler, Chris
Published in Proceedings of the National Academy of Sciences - PNAS (29.07.2008)
Published in Proceedings of the National Academy of Sciences - PNAS (29.07.2008)
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Journal Article
Oceanographic and biogeochemical insights from diatom genomes
Bowler, Chris, Vardi, Assaf, Allen, Andrew E
Published in Annual review of marine science (01.01.2010)
Published in Annual review of marine science (01.01.2010)
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Journal Article
Downregulation of mitochondrial alternative oxidase affects chloroplast function, redox status and stress response in a marine diatom
Murik, Omer, Tirichine, Leila, Prihoda, Judit, Thomas, Yann, Araújo, Wagner L., Allen, Andrew E., Fernie, Alisdair R., Bowler, Chris
Published in The New phytologist (01.02.2019)
Published in The New phytologist (01.02.2019)
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