by Generous, Nicholas, Fairchild, Geoffrey, Deshpande, Alina, Del Valle, Sara Y, Priedhorsky, Reid
Published in PLoS computational biology (01.11.2014)

by Hickmann, Kyle S, Fairchild, Geoffrey, Priedhorsky, Reid, Generous, Nicholas, Hyman, James M, Deshpande, Alina, Del Valle, Sara Y
Published in PLoS computational biology (01.05.2015)

by Velappan, Nileena, Davis-Anderson, Katie, Deshpande, Alina
Published in Frontiers in microbiology (24.02.2022)

by Fairchild, Geoffrey, Tasseff, Byron, Khalsa, Hari, Generous, Nicholas, Daughton, Ashlynn R, Velappan, Nileena, Priedhorsky, Reid, Deshpande, Alina
Published in Frontiers in public health (23.11.2018)

by Daughton, Ashlynn R, Velappan, Nileena, Abeyta, Esteban, Priedhorsky, Reid, Deshpande, Alina
Published in PloS one (08.07.2016)

by Margevicius, Kristen J, Generous, Nicholas, Taylor-McCabe, Kirsten J, Brown, Mac, Daniel, W Brent, Castro, Lauren, Hengartner, Andrea, Deshpande, Alina
Published in PloS one (02.01.2014)

by Van Cuyk, Sheila, Deshpande, Alina, Hollander, Attelia, Duval, Nathan, Ticknor, Lawrence, Layshock, Julie, Gallegos-Graves, Laverne, Omberg, Kristin M
Published in Applied and Environmental Microbiology (01.11.2011)

by Daughton, Ashlynn R, Priedhorsky, Reid, Fairchild, Geoffrey, Generous, Nicholas, Hengartner, Andrea, Abeyta, Esteban, Velappan, Nileena, Lillo, Antonietta, Stark, Karen, Deshpande, Alina
Published in BMC infectious diseases (07.08.2017)

by Margevicius, Kristen J, Generous, Nicholas, Abeyta, Esteban, Althouse, Ben, Burkom, Howard, Castro, Lauren, Daughton, Ashlynn, Del Valle, Sara Y, Fairchild, Geoffrey, Hyman, James M, Kiang, Richard, Morse, Andrew P, Pancerella, Carmen M, Pullum, Laura, Ramanathan, Arvind, Schlegelmilch, Jeffrey, Scott, Aaron, Taylor-McCabe, Kirsten J, Vespignani, Alessandro, Deshpande, Alina
Published in PloS one (28.01.2016)

by Stromberg, Zachary R, Theiler, James, Foley, Brian T, Myers Y Gutiérrez, Adán, Hollander, Attelia, Courtney, Samantha J, Gans, Jason, Deshpande, Alina, Martinez-Finley, Ebany J, Mitchell, Jason, Mukundan, Harshini, Yusim, Karina, Kubicek-Sutherland, Jessica Z
Published in PLOS global public health (2022)

by Generous, Nicholas, Margevicius, Kristen J, Taylor-McCabe, Kirsten J, Brown, Mac, Daniel, W Brent, Castro, Lauren, Hengartner, Andrea, Deshpande, Alina
Published in PloS one (29.01.2014)

by Woods, Travis A, Mendez, Heather M, Ortega, Sandy, Shi, Xiaorong, Marx, David, Bai, Jianfa, Moxley, Rodney A, Nagaraja, T G, Graves, Steven W, Deshpande, Alina
Published in Frontiers in cellular and infection microbiology (31.08.2016)

by Cai, Hong, White, P.Scott, Torney, David, Deshpande, Alina, Wang, Zaolin, Marrone, Babetta, Nolan, John P.
Published in Genomics (San Diego, Calif.) (01.06.2000)

by Deshpande, Alina, White, Paul Scott
Published in Expert review of molecular diagnostics (01.07.2012)

by Daughton, Ashlynn R., Generous, Nicholas, Priedhorsky, Reid, Deshpande, Alina
Published in Scientific reports (18.04.2017)

by Pollett, Simon, Johansson, Michael A, Reich, Nicholas G, Brett-Major, David, Del Valle, Sara Y, Venkatramanan, Srinivasan, Lowe, Rachel, Porco, Travis, Berry, Irina Maljkovic, Deshpande, Alina, Kraemer, Moritz U G, Blazes, David L, Pan-Ngum, Wirichada, Vespigiani, Alessandro, Mate, Suzanne E, Silal, Sheetal P, Kandula, Sasikiran, Sippy, Rachel, Quandelacy, Talia M, Morgan, Jeffrey J, Ball, Jacob, Morton, Lindsay C, Althouse, Benjamin M, Pavlin, Julie, van Panhuis, Wilbert, Riley, Steven, Biggerstaff, Matthew, Viboud, Cecile, Brady, Oliver, Rivers, Caitlin
Published in PLoS medicine (19.10.2021)

by Daughton, Ashlynn R., Generous, Nicholas, Priedhorsky, Reid, Deshpande, Alina
Published in Scientific reports (19.06.2017)

by Daughton, Ashlynn, Deshpande, Alina
Published in Online journal of public health informatics (24.03.2016)

by Simon Pollett, Michael A Johansson, Nicholas G Reich, David Brett-Major, Sara Y Del Valle, Srinivasan Venkatramanan, Rachel Lowe, Travis Porco, Irina Maljkovic Berry, Alina Deshpande, Moritz U G Kraemer, David L Blazes, Wirichada Pan-Ngum, Alessandro Vespigiani, Suzanne E Mate, Sheetal P Silal, Sasikiran Kandula, Rachel Sippy, Talia M Quandelacy, Jeffrey J Morgan, Jacob Ball, Lindsay C Morton, Benjamin M Althouse, Julie Pavlin, Wilbert van Panhuis, Steven Riley, Matthew Biggerstaff, Cecile Viboud, Oliver Brady, Caitlin Rivers
Published in PLoS medicine (01.11.2023)

by Mercer, Tim, Almond, Neil, Crone, Michael A., Chain, Patrick S. G., Deshpande, Alina, Eveleigh, Deepa, Freemont, Paul, Fuchs, Sebastien, Garlick, Russell, Huggett, Jim, Kammel, Martin, Li, Po-E, Milavec, Mojca, Marlowe, Elizabeth M., O’Sullivan, Denise M., Page, Mark, Pestano, Gary A., Suliman, Sara, Simen, Birgitte, Sninsky, John J., Sopchak, Lynne, Tato, Cristina M., Vallone, Peter M., Vandesompele, Jo, White, Thomas J., Zeichhardt, Heinz, Salit, Marc
Published in Nature biotechnology (01.11.2022)