The Intestinal Microbiota Contributes to the Ability of Helminths to Modulate Allergic Inflammation
Zaiss, Mario M., Rapin, Alexis, Lebon, Luc, Dubey, Lalit Kumar, Mosconi, Ilaria, Sarter, Kerstin, Piersigilli, Alessandra, Menin, Laure, Walker, Alan W., Rougemont, Jacques, Paerewijck, Oonagh, Geldhof, Peter, McCoy, Kathleen D., Macpherson, Andrew J., Croese, John, Giacomin, Paul R., Loukas, Alex, Junt, Tobias, Marsland, Benjamin J., Harris, Nicola L.
Published in Immunity (Cambridge, Mass.) (17.11.2015)
Published in Immunity (Cambridge, Mass.) (17.11.2015)
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Journal Article
Assembly of 913 microbial genomes from metagenomic sequencing of the cow rumen
Stewart, Robert D, Auffret, Marc D, Warr, Amanda, Wiser, Andrew H, Press, Maximilian O, Langford, Kyle W, Liachko, Ivan, Snelling, Timothy J, Dewhurst, Richard J, Walker, Alan W, Roehe, Rainer, Watson, Mick
Published in Nature communications (28.02.2018)
Published in Nature communications (28.02.2018)
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Journal Article
The Transcription Factor T-bet Regulates Intestinal Inflammation Mediated by Interleukin-7 Receptor+ Innate Lymphoid Cells
Powell, Nick, Walker, Alan W., Stolarczyk, Emilie, Canavan, James B., Gökmen, M. Refik, Marks, Ellen, Jackson, Ian, Hashim, Ahmed, Curtis, Michael A., Jenner, Richard G., Howard, Jane K., Parkhill, Julian, MacDonald, Thomas T., Lord, Graham M.
Published in Immunity (Cambridge, Mass.) (19.10.2012)
Published in Immunity (Cambridge, Mass.) (19.10.2012)
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Journal Article
Bacterial microbiota of the upper respiratory tract and childhood asthma
Depner, Martin, PhD, Ege, Markus J., MD, Cox, Michael J., PhD, Dwyer, Sarah, PhD, Walker, Alan W., PhD, Birzele, Lena T, Genuneit, Jon, MD, Horak, Elisabeth, MD, Braun-Fahrländer, Charlotte, MD, Danielewicz, Hanna, MD, PhD, Maier, Raina M., PhD, Moffatt, Miriam F., PhD, Cookson, William O., MD, Heederik, Dick, PhD, von Mutius, Erika, MD, Legatzki, Antje, PhD
Published in Journal of allergy and clinical immunology (01.03.2017)
Published in Journal of allergy and clinical immunology (01.03.2017)
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Journal Article
The impact of different DNA extraction kits and laboratories upon the assessment of human gut microbiota composition by 16S rRNA gene sequencing
Kennedy, Nicholas A, Walker, Alan W, Berry, Susan H, Duncan, Sylvia H, Farquarson, Freda M, Louis, Petra, Thomson, John M, Satsangi, Jack, Flint, Harry J, Parkhill, Julian, Lees, Charlie W, Hold, Georgina L
Published in PloS one (24.02.2014)
Published in PloS one (24.02.2014)
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High-throughput clone library analysis of the mucosa-associated microbiota reveals dysbiosis and differences between inflamed and non-inflamed regions of the intestine in inflammatory bowel disease
Walker, Alan W, Sanderson, Jeremy D, Churcher, Carol, Parkes, Gareth C, Hudspith, Barry N, Rayment, Neil, Brostoff, Jonathan, Parkhill, Julian, Dougan, Gordon, Petrovska, Liljana
Published in BMC microbiology (10.01.2011)
Published in BMC microbiology (10.01.2011)
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Dominant and diet-responsive groups of bacteria within the human colonic microbiota
Walker, Alan W, Ince, Jennifer, Duncan, Sylvia H, Webster, Lucy M, Holtrop, Grietje, Ze, Xiaolei, Brown, David, Stares, Mark D, Scott, Paul, Bergerat, Aurore, Louis, Petra, McIntosh, Freda, Johnstone, Alexandra M, Lobley, Gerald E, Parkhill, Julian, Flint, Harry J
Published in The ISME Journal (01.02.2011)
Published in The ISME Journal (01.02.2011)
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Analysis of 1321 Eubacterium rectale genomes from metagenomes uncovers complex phylogeographic population structure and subspecies functional adaptations
Karcher, Nicolai, Pasolli, Edoardo, Asnicar, Francesco, Huang, Kun D, Tett, Adrian, Manara, Serena, Armanini, Federica, Bain, Debbie, Duncan, Sylvia H, Louis, Petra, Zolfo, Moreno, Manghi, Paolo, Valles-Colomer, Mireia, Raffaetà, Roberta, Rota-Stabelli, Omar, Collado, Maria Carmen, Zeller, Georg, Falush, Daniel, Maixner, Frank, Walker, Alan W, Huttenhower, Curtis, Segata, Nicola
Published in Genome Biology (08.06.2020)
Published in Genome Biology (08.06.2020)
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Patent human infections with the whipworm, Trichuris trichiura, are not associated with alterations in the faecal microbiota
Cooper, Philip, Walker, Alan W, Reyes, Jorge, Chico, Martha, Salter, Susannah J, Vaca, Maritza, Parkhill, Julian
Published in PloS one (04.10.2013)
Published in PloS one (04.10.2013)
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Journal Article
Targeted restoration of the intestinal microbiota with a simple, defined bacteriotherapy resolves relapsing Clostridium difficile disease in mice
Lawley, Trevor D, Clare, Simon, Walker, Alan W, Stares, Mark D, Connor, Thomas R, Raisen, Claire, Goulding, David, Rad, Roland, Schreiber, Fernanda, Brandt, Cordelia, Deakin, Laura J, Pickard, Derek J, Duncan, Sylvia H, Flint, Harry J, Clark, Taane G, Parkhill, Julian, Dougan, Gordon
Published in PLoS pathogens (01.10.2012)
Published in PLoS pathogens (01.10.2012)
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Journal Article
Gut inflammation can boost horizontal gene transfer between pathogenic and commensal Enterobacteriaceae
Stecher, Bärbel, Denzler, Rémy, Maier, Lisa, Bernet, Florian, Sanders, Mandy J., Pickard, Derek J., Barthel, Manja, Westendorf, Astrid M., Krogfelt, Karen A., Walker, Alan W., Ackermann, Martin, Dobrindt, Ulrich, Thomson, Nicholas R., Hardt, Wolf-Dietrich
Published in Proceedings of the National Academy of Sciences - PNAS (24.01.2012)
Published in Proceedings of the National Academy of Sciences - PNAS (24.01.2012)
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Journal Article
Relative abundance of the Prevotella genus within the human gut microbiota of elderly volunteers determines the inter-individual responses to dietary supplementation with wheat bran arabinoxylan-oligosaccharides
Chung, Wing Sun Faith, Walker, Alan W, Bosscher, Douwina, Garcia-Campayo, Vicenta, Wagner, Josef, Parkhill, Julian, Duncan, Sylvia H, Flint, Harry J
Published in BMC microbiology (14.09.2020)
Published in BMC microbiology (14.09.2020)
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Journal Article
Lung function and microbiota diversity in cystic fibrosis
Cuthbertson, Leah, Walker, Alan W, Oliver, Anna E, Rogers, Geraint B, Rivett, Damian W, Hampton, Thomas H, Ashare, Alix, Elborn, J Stuart, De Soyza, Anthony, Carroll, Mary P, Hoffman, Lucas R, Lanyon, Clare, Moskowitz, Samuel M, O'Toole, George A, Parkhill, Julian, Planet, Paul J, Teneback, Charlotte C, Tunney, Michael M, Zuckerman, Jonathan B, Bruce, Kenneth D, van der Gast, Christopher J
Published in Microbiome (02.04.2020)
Published in Microbiome (02.04.2020)
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Journal Article
TLR signaling modulates side effects of anticancer therapy in the small intestine
Frank, Magdalena, Hennenberg, Eva Maria, Eyking, Annette, Rünzi, Michael, Gerken, Guido, Scott, Paul, Parkhill, Julian, Walker, Alan W, Cario, Elke
Published in The Journal of immunology (1950) (15.02.2015)
Published in The Journal of immunology (1950) (15.02.2015)
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Journal Article
Sporulation capability and amylosome conservation among diverse human colonic and rumen isolates of the keystone starch‐degrader Ruminococcus bromii
Mukhopadhya, Indrani, Moraïs, Sarah, Laverde‐Gomez, Jenny, Sheridan, Paul O., Walker, Alan W., Kelly, William, Klieve, Athol V., Ouwerkerk, Diane, Duncan, Sylvia H., Louis, Petra, Koropatkin, Nicole, Cockburn, Darrell, Kibler, Ryan, Cooper, Philip J., Sandoval, Carlos, Crost, Emmanuelle, Juge, Nathalie, Bayer, Edward A., Flint, Harry J.
Published in Environmental microbiology (01.01.2018)
Published in Environmental microbiology (01.01.2018)
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