TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools
Monat, Cécile, Padmarasu, Sudharsan, Lux, Thomas, Wicker, Thomas, Gundlach, Heidrun, Himmelbach, Axel, Ens, Jennifer, Li, Chengdao, Muehlbauer, Gary J, Schulman, Alan H, Waugh, Robbie, Braumann, Ilka, Pozniak, Curtis, Scholz, Uwe, Mayer, Klaus F X, Spannagl, Manuel, Stein, Nils, Mascher, Martin
Published in Genome Biology (18.12.2019)
Published in Genome Biology (18.12.2019)
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Cloning of the wheat Yr15 resistance gene sheds light on the plant tandem kinase-pseudokinase family
Klymiuk, Valentina, Yaniv, Elitsur, Huang, Lin, Raats, Dina, Fatiukha, Andrii, Chen, Shisheng, Feng, Lihua, Frenkel, Zeev, Krugman, Tamar, Lidzbarsky, Gabriel, Chang, Wei, Jääskeläinen, Marko J, Schudoma, Christian, Paulin, Lars, Laine, Pia, Bariana, Harbans, Sela, Hanan, Saleem, Kamran, Sørensen, Chris Khadgi, Hovmøller, Mogens S, Distelfeld, Assaf, Chalhoub, Boulos, Dubcovsky, Jorge, Korol, Abraham B, Schulman, Alan H, Fahima, Tzion
Published in Nature communications (03.10.2018)
Published in Nature communications (03.10.2018)
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Java web tools for PCR, in silico PCR, and oligonucleotide assembly and analysis
Kalendar, Ruslan, Lee, David, Schulman, Alan H.
Published in Genomics (San Diego, Calif.) (01.08.2011)
Published in Genomics (San Diego, Calif.) (01.08.2011)
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Journal Article
The genome of cowpea (Vigna unguiculata [L.] Walp.)
Lonardi, Stefano, Muñoz‐Amatriaín, María, Liang, Qihua, Shu, Shengqiang, Wanamaker, Steve I., Lo, Sassoum, Tanskanen, Jaakko, Schulman, Alan H., Zhu, Tingting, Luo, Ming‐Cheng, Alhakami, Hind, Ounit, Rachid, Hasan, Abid Md, Verdier, Jerome, Roberts, Philip A., Santos, Jansen R.P., Ndeve, Arsenio, Doležel, Jaroslav, Vrána, Jan, Hokin, Samuel A., Farmer, Andrew D., Cannon, Steven B., Close, Timothy J.
Published in The Plant journal : for cell and molecular biology (01.06.2019)
Published in The Plant journal : for cell and molecular biology (01.06.2019)
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Journal Article
A unified classification system for eukaryotic transposable elements
Schulman, Alan H, Wicker, Thomas, Sabot, François, Hua-Van, Aurélie, Bennetzen, Jeffrey L, Capy, Pierre, Chalhoub, Boulos, Flavell, Andrew, Leroy, Philippe, Morgante, Michele, Panaud, Olivier, Paux, Etienne, SanMiguel, Phillip
Published in Nature reviews. Genetics (01.12.2007)
Published in Nature reviews. Genetics (01.12.2007)
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Anchoring and ordering NGS contig assemblies by population sequencing (POPSEQ)
Mascher, Martin, Muehlbauer, Gary J., Rokhsar, Daniel S., Chapman, Jarrod, Schmutz, Jeremy, Barry, Kerrie, Muñoz‐Amatriaín, María, Close, Timothy J., Wise, Roger P., Schulman, Alan H., Himmelbach, Axel, Mayer, Klaus F.X., Scholz, Uwe, Poland, Jesse A., Stein, Nils, Waugh, Robbie
Published in The Plant journal : for cell and molecular biology (01.11.2013)
Published in The Plant journal : for cell and molecular biology (01.11.2013)
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Journal Article
Drought and recovery in barley: key gene networks and retrotransposon response
Paul, Maitry, Tanskanen, Jaakko, Jääskeläinen, Marko, Chang, Wei, Dalal, Ahan, Moshelion, Menachem, Schulman, Alan H
Published in Frontiers in plant science (12.06.2023)
Published in Frontiers in plant science (12.06.2023)
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Multi-environment genome -wide association mapping of culm morphology traits in barley
Bretani, Gianluca, Shaaf, Salar, Tondelli, Alessandro, Cattivelli, Luigi, Delbono, Stefano, Waugh, Robbie, Thomas, William, Russell, Joanne, Bull, Hazel, Igartua, Ernesto, Casas, Ana M., Gracia, Pilar, Rossi, Roberta, Schulman, Alan H., Rossini, Laura
Published in Frontiers in plant science (23.09.2022)
Published in Frontiers in plant science (23.09.2022)
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Journal Article
International Barley Sequencing Consortium--At the Threshold of Efficient Access to the Barley Genome
Schulte, Daniela, Close, Timothy J, Graner, Andreas, Langridge, Peter, Matsumoto, Takashi, Muehlbauer, Gary, Sato, Kazuhiro, Schulman, Alan H, Waugh, Robbie, Wise, Roger P, Stein, Nils
Published in Plant physiology (Bethesda) (01.01.2009)
Published in Plant physiology (Bethesda) (01.01.2009)
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Journal Article
Drought response of water-conserving and non-conserving spring barley cultivars
Appiah, Mercy, Abdulai, Issaka, Schulman, Alan H., Moshelion, Menachem, Dewi, Elvira S., Daszkowska-Golec, Agata, Bracho-Mujica, Gennady, Rötter, Reimund P.
Published in Frontiers in plant science (24.10.2023)
Published in Frontiers in plant science (24.10.2023)
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Journal Article
Recent advances in faba bean genetic and genomic tools for crop improvement
Khazaei, Hamid, O'Sullivan, Donal M., Stoddard, Frederick L., Adhikari, Kedar N., Paull, Jeffrey G., Schulman, Alan H., Andersen, Stig U., Vandenberg, Albert
Published in Legume science (01.09.2021)
Published in Legume science (01.09.2021)
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Journal Article
The repetitive landscape of the 5100 Mbp barley genome
Wicker, Thomas, Schulman, Alan H, Tanskanen, Jaakko, Spannagl, Manuel, Twardziok, Sven, Mascher, Martin, Springer, Nathan M, Li, Qing, Waugh, Robbie, Li, Chengdao, Zhang, Guoping, Stein, Nils, Mayer, Klaus F X, Gundlach, Heidrun
Published in Mobile DNA (20.12.2017)
Published in Mobile DNA (20.12.2017)
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Journal Article
Genome Evolution of Wild Barley (Hordeum spontaneum) by BARE-1 Retrotransposon Dynamics in Response to Sharp Microclimatic Divergence
Kalendar, Ruslan, Tanskanen, Jaakko, Immonen, Sirkka, Nevo, Eviatar, Schulman, Alan H.
Published in Proceedings of the National Academy of Sciences - PNAS (06.06.2000)
Published in Proceedings of the National Academy of Sciences - PNAS (06.06.2000)
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