Gene count normalization in single-cell imaging-based spatially resolved transcriptomics
Atta, Lyla, Clifton, Kalen, Anant, Manjari, Aihara, Gohta, Fan, Jean
Published in Genome Biology (12.06.2024)
Published in Genome Biology (12.06.2024)
Get full text
Journal Article
STalign: Alignment of spatial transcriptomics data using diffeomorphic metric mapping
Clifton, Kalen, Anant, Manjari, Aihara, Gohta, Atta, Lyla, Aimiuwu, Osagie K., Kebschull, Justus M., Miller, Michael I., Tward, Daniel, Fan, Jean
Published in Nature communications (08.12.2023)
Published in Nature communications (08.12.2023)
Get full text
Journal Article
Nanoparticle-based modulation of CD4+ T cell effector and helper functions enhances adoptive immunotherapy
Isser, Ariel, Silver, Aliyah B., Pruitt, Hawley C., Mass, Michal, Elias, Emma H., Aihara, Gohta, Kang, Si-Sim, Bachmann, Niklas, Chen, Ying-Yu, Leonard, Elissa K., Bieler, Joan G., Chaisawangwong, Worarat, Choy, Joseph, Shannon, Sydney R., Gerecht, Sharon, Weber, Jeffrey S., Spangler, Jamie B., Schneck, Jonathan P.
Published in Nature communications (14.10.2022)
Published in Nature communications (14.10.2022)
Get full text
Journal Article
Adequacy of samples obtained via percutaneous core-needle rebiopsy for EGFR T790M molecular analysis in patients with non-small cell lung cancer following acquired resistance to first-line therapy: A systematic review and meta-analysis
Poudel, Bibhav, Desman, Jacob, Aihara, Gohta, Weidman, Deborah I., Tsang, Ashley, Kovrizhkin, Katherine, Pereira, Tatiana, Arun, Siddharth, Pradeep, Tejus, Matin, Shababa, Liddell, Robert P.
Published in Cancer treatment and research communications (2021)
Published in Cancer treatment and research communications (2021)
Get full text
Journal Article
SEraster: a rasterization preprocessing framework for scalable spatial omics data analysis
Aihara, Gohta, Clifton, Kalen, Chen, Mayling, Li, Zhuoyan, Atta, Lyla, Miller, Brendan F, Satija, Rahul, Hickey, John W, Fan, Jean
Published in Bioinformatics (Oxford, England) (01.07.2024)
Published in Bioinformatics (Oxford, England) (01.07.2024)
Get full text
Journal Article
Gene count normalization in single-cell imaging-based spatially resolved transcriptomics
Atta, Lyla, Clifton, Kalen, Anant, Manjari, Aihara, Gohta, Fan, Jean
Published in bioRxiv (06.03.2024)
Published in bioRxiv (06.03.2024)
Get full text
Journal Article
Characterizing cell-type spatial relationships across length scales in spatially resolved omics data
Dos Santos Peixoto, Rafael, Miller, Brendan F, Brusko, Maigan A, Aihara, Gohta, Atta, Lyla, Anant, Manjari, Atkinson, Mark A, Brusko, Todd M, Wasserfall, Clive H, Fan, Jean
Published in bioRxiv (14.09.2024)
Published in bioRxiv (14.09.2024)
Get full text
Journal Article
Alignment of spatial transcriptomics data using diffeomorphic metric mapping
Clifton, Kalen, Anant, Manjari, Aihara, Gohta, Atta, Lyla, Aimiuwu, Osagie K, Kebschull, Justus M, Miller, Michael I, Tward, Daniel, Fan, Jean
Published in bioRxiv (19.08.2023)
Published in bioRxiv (19.08.2023)
Get full text
Journal Article
BIOPSY NEEDLE ACCESSORY
WEIDMAN, Deborah I, PEREIRA, Tatiana, DARCY, Sean, MATIN, Shababa, AIHARA, Gohta, KOVRIZHKIN, Katherine, DESMAN, Jacob Maxwell, LIDDELL, Robert, POUDEL, Bibhav, ZHANG, Jinghua, TSANG, Ashley
Year of Publication 07.08.2024
Get full text
Year of Publication 07.08.2024
Patent
BIOPSY NEEDLE ACCESSORY
MATIN, Shababa, WEIDMAN, Deborah I, PEREIRA, Tatiana, DARCY, Sean, AIHARA, Gohta, KOVRIZHKIN, Katherine, DESMAN, Jacob Maxwell, LIDDELL, Robert, ZHANG, Jinghua, POUDEL, Bibhav, TSANG, Ashley
Year of Publication 06.04.2023
Get full text
Year of Publication 06.04.2023
Patent