Neural Circuits Underlying Visually Evoked Escapes in Larval Zebrafish
Dunn, Timothy W., Gebhardt, Christoph, Naumann, Eva A., Riegler, Clemens, Ahrens, Misha B., Engert, Florian, Del Bene, Filippo
Published in Neuron (Cambridge, Mass.) (03.02.2016)
Published in Neuron (Cambridge, Mass.) (03.02.2016)
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Journal Article
Whole-brain functional imaging at cellular resolution using light-sheet microscopy
Ahrens, Misha B, Orger, Michael B, Robson, Drew N, Li, Jennifer M, Keller, Philipp J
Published in Nature methods (01.05.2013)
Published in Nature methods (01.05.2013)
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Journal Article
Fast and sensitive GCaMP calcium indicators for imaging neural populations
Zhang, Yan, Rózsa, Márton, Liang, Yajie, Bushey, Daniel, Wei, Ziqiang, Zheng, Jihong, Reep, Daniel, Broussard, Gerard Joey, Tsang, Arthur, Tsegaye, Getahun, Narayan, Sujatha, Obara, Christopher J, Lim, Jing-Xuan, Patel, Ronak, Zhang, Rongwei, Ahrens, Misha B, Turner, Glenn C, Wang, Samuel S-H, Korff, Wyatt L, Schreiter, Eric R, Svoboda, Karel, Hasseman, Jeremy P, Kolb, Ilya, Looger, Loren L
Published in Nature (London) (30.03.2023)
Published in Nature (London) (30.03.2023)
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Journal Article
Spinal Projection Neurons Control Turning Behaviors in Zebrafish
Huang, Kuo-Hua, Ahrens, Misha B., Dunn, Timothy W., Engert, Florian
Published in Current biology (19.08.2013)
Published in Current biology (19.08.2013)
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Journal Article
Bright and photostable chemigenetic indicators for extended in vivo voltage imaging
Abdelfattah, Ahmed S, Kawashima, Takashi, Singh, Amrita, Novak, Ondrej, Liu, Hui, Shuai, Yichun, Huang, Yi-Chieh, Campagnola, Luke, Seeman, Stephanie C, Yu, Jianing, Zheng, Jihong, Grimm, Jonathan B, Patel, Ronak, Friedrich, Johannes, Mensh, Brett D, Paninski, Liam, Macklin, John J, Murphy, Gabe J, Podgorski, Kaspar, Lin, Bei-Jung, Chen, Tsai-Wen, Turner, Glenn C, Liu, Zhe, Koyama, Minoru, Svoboda, Karel, Ahrens, Misha B, Lavis, Luke D, Schreiter, Eric R
Published in Science (American Association for the Advancement of Science) (16.08.2019)
Published in Science (American Association for the Advancement of Science) (16.08.2019)
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Journal Article
Brain-wide Organization of Neuronal Activity and Convergent Sensorimotor Transformations in Larval Zebrafish
Chen, Xiuye, Mu, Yu, Hu, Yu, Kuan, Aaron T., Nikitchenko, Maxim, Randlett, Owen, Chen, Alex B., Gavornik, Jeffery P., Sompolinsky, Haim, Engert, Florian, Ahrens, Misha B.
Published in Neuron (Cambridge, Mass.) (21.11.2018)
Published in Neuron (Cambridge, Mass.) (21.11.2018)
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Journal Article
A robotic multidimensional directed evolution approach applied to fluorescent voltage reporters
Piatkevich, Kiryl D, Jung, Erica E, Straub, Christoph, Linghu, Changyang, Park, Demian, Suk, Ho-Jun, Hochbaum, Daniel R, Goodwin, Daniel, Pnevmatikakis, Eftychios, Pak, Nikita, Kawashima, Takashi, Yang, Chao-Tsung, Rhoades, Jeffrey L, Shemesh, Or, Asano, Shoh, Yoon, Young-Gyu, Freifeld, Limor, Saulnier, Jessica L, Riegler, Clemens, Engert, Florian, Hughes, Thom, Drobizhev, Mikhail, Szabo, Balint, Ahrens, Misha B, Flavell, Steven W, Sabatini, Bernardo L, Boyden, Edward S
Published in Nature chemical biology (01.04.2018)
Published in Nature chemical biology (01.04.2018)
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Journal Article
Calcium imaging of neural circuits with extended depth-of-field light-sheet microscopy
Quirin, Sean, Vladimirov, Nikita, Yang, Chao-Tsung, Peterka, Darcy S, Yuste, Rafael, Ahrens, Misha B
Published in Optics letters (01.03.2016)
Published in Optics letters (01.03.2016)
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Journal Article
The Serotonergic System Tracks the Outcomes of Actions to Mediate Short-Term Motor Learning
Kawashima, Takashi, Zwart, Maarten F., Yang, Chao-Tsung, Mensh, Brett D., Ahrens, Misha B.
Published in Cell (03.11.2016)
Published in Cell (03.11.2016)
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Journal Article
Sensitive red protein calcium indicators for imaging neural activity
Dana, Hod, Mohar, Boaz, Sun, Yi, Narayan, Sujatha, Gordus, Andrew, Hasseman, Jeremy P, Tsegaye, Getahun, Holt, Graham T, Hu, Amy, Walpita, Deepika, Patel, Ronak, Macklin, John J, Bargmann, Cornelia I, Ahrens, Misha B, Schreiter, Eric R, Jayaraman, Vivek, Looger, Loren L, Svoboda, Karel, Kim, Douglas S
Published in eLife (24.03.2016)
Published in eLife (24.03.2016)
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Journal Article
Light-sheet functional imaging in fictively behaving zebrafish
Vladimirov, Nikita, Mu, Yu, Kawashima, Takashi, Bennett, Davis V, Yang, Chao-Tsung, Looger, Loren L, Keller, Philipp J, Freeman, Jeremy, Ahrens, Misha B
Published in Nature methods (01.09.2014)
Published in Nature methods (01.09.2014)
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Journal Article
Brain-wide mapping of neural activity controlling zebrafish exploratory locomotion
Dunn, Timothy W, Mu, Yu, Narayan, Sujatha, Randlett, Owen, Naumann, Eva A, Yang, Chao-Tsung, Schier, Alexander F, Freeman, Jeremy, Engert, Florian, Ahrens, Misha B
Published in eLife (22.03.2016)
Published in eLife (22.03.2016)
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Journal Article
Optogenetics in a transparent animal: circuit function in the larval zebrafish
Portugues, Ruben, Severi, Kristen E, Wyart, Claire, Ahrens, Misha B
Published in Current opinion in neurobiology (01.02.2013)
Published in Current opinion in neurobiology (01.02.2013)
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Journal Article
Precision Calcium Imaging of Dense Neural Populations via a Cell-Body-Targeted Calcium Indicator
Shemesh, Or A., Linghu, Changyang, Piatkevich, Kiryl D., Goodwin, Daniel, Celiker, Orhan Tunc, Gritton, Howard J., Romano, Michael F., Gao, Ruixuan, Yu, Chih-Chieh (Jay), Tseng, Hua-An, Bensussen, Seth, Narayan, Sujatha, Yang, Chao-Tsung, Freifeld, Limor, Siciliano, Cody A., Gupta, Ishan, Wang, Joyce, Pak, Nikita, Yoon, Young-Gyu, Ullmann, Jeremy F.P., Guner-Ataman, Burcu, Noamany, Habiba, Sheinkopf, Zoe R., Park, Won Min, Asano, Shoh, Keating, Amy E., Trimmer, James S., Reimer, Jacob, Tolias, Andreas S., Bear, Mark F., Tye, Kay M., Han, Xue, Ahrens, Misha B., Boyden, Edward S.
Published in Neuron (Cambridge, Mass.) (05.08.2020)
Published in Neuron (Cambridge, Mass.) (05.08.2020)
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Journal Article
Brain-wide circuit interrogation at the cellular level guided by online analysis of neuronal function
Vladimirov, Nikita, Wang, Chen, Höckendorf, Burkhard, Pujala, Avinash, Tanimoto, Masashi, Mu, Yu, Yang, Chao-Tsung, Wittenbach, Jason D, Freeman, Jeremy, Preibisch, Stephan, Koyama, Minoru, Keller, Philipp J, Ahrens, Misha B
Published in Nature methods (01.12.2018)
Published in Nature methods (01.12.2018)
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Journal Article
Time-resolved correlation of distributed brain activity tracks E-I balance and accounts for diverse scale-free phenomena
Nanda, Aditya, Johnson, Graham W., Mu, Yu, Ahrens, Misha B., Chang, Catie, Englot, Dario J., Breakspear, Michael, Rubinov, Mikail
Published in Cell reports (Cambridge) (25.04.2023)
Published in Cell reports (Cambridge) (25.04.2023)
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Journal Article
Identification of nonvisual photomotor response cells in the vertebrate hindbrain
Kokel, David, Dunn, Timothy W, Ahrens, Misha B, Alshut, Rüdiger, Cheung, Chung Yan J, Saint-Amant, Louis, Bruni, Giancarlo, Mateus, Rita, van Ham, Tjakko J, Shiraki, Tomoya, Fukada, Yoshitaka, Kojima, Daisuke, Yeh, Jing-Ruey J, Mikut, Ralf, von Lintig, Johannes, Engert, Florian, Peterson, Randall T
Published in The Journal of neuroscience (27.02.2013)
Published in The Journal of neuroscience (27.02.2013)
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