Taxonomic assignment of uncultivated prokaryotic virus genomes is enabled by gene-sharing networks
Bin Jang, Ho, Bolduc, Benjamin, Zablocki, Olivier, Kuhn, Jens H., Roux, Simon, Adriaenssens, Evelien M., Brister, J. Rodney, Kropinski, Andrew M, Krupovic, Mart, Lavigne, Rob, Turner, Dann, Sullivan, Matthew B.
Published in Nature biotechnology (01.06.2019)
Published in Nature biotechnology (01.06.2019)
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Viral indicators for tracking domestic wastewater contamination in the aquatic environment
Farkas, Kata, Walker, David I., Adriaenssens, Evelien M., McDonald, James E., Hillary, Luke S., Malham, Shelagh K., Jones, Davey L.
Published in Water research (Oxford) (15.08.2020)
Published in Water research (Oxford) (15.08.2020)
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Changes to virus taxonomy and to the International Code of Virus Classification and Nomenclature ratified by the International Committee on Taxonomy of Viruses (2021)
Walker, Peter J., Siddell, Stuart G., Lefkowitz, Elliot J., Mushegian, Arcady R., Adriaenssens, Evelien M., Alfenas-Zerbini, Poliane, Davison, Andrew J., Dempsey, Donald M., Dutilh, Bas E., García, María Laura, Harrach, Balázs, Harrison, Robert L., Hendrickson, R. Curtis, Junglen, Sandra, Knowles, Nick J., Krupovic, Mart, Kuhn, Jens H., Lambert, Amy J., Łobocka, Małgorzata, Nibert, Max L., Oksanen, Hanna M., Orton, Richard J., Robertson, David L., Rubino, Luisa, Sabanadzovic, Sead, Simmonds, Peter, Smith, Donald B., Suzuki, Nobuhiro, Van Dooerslaer, Koenraad, Vandamme, Anne-Mieke, Varsani, Arvind, Zerbini, Francisco Murilo
Published in Archives of virology (01.09.2021)
Published in Archives of virology (01.09.2021)
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Abolishment of morphology-based taxa and change to binomial species names: 2022 taxonomy update of the ICTV bacterial viruses subcommittee
Turner, Dann, Shkoporov, Andrey N., Lood, Cédric, Millard, Andrew D., Dutilh, Bas E., Alfenas-Zerbini, Poliane, van Zyl, Leonardo J., Aziz, Ramy K., Oksanen, Hanna M., Poranen, Minna M., Kropinski, Andrew M., Barylski, Jakub, Brister, J Rodney, Chanisvili, Nina, Edwards, Rob A., Enault, François, Gillis, Annika, Knezevic, Petar, Krupovic, Mart, Kurtböke, Ipek, Kushkina, Alla, Lavigne, Rob, Lehman, Susan, Lobocka, Malgorzata, Moraru, Cristina, Moreno Switt, Andrea, Morozova, Vera, Nakavuma, Jesca, Reyes Muñoz, Alejandro, Rūmnieks, Jānis, Sarkar, BL, Sullivan, Matthew B., Uchiyama, Jumpei, Wittmann, Johannes, Yigang, Tong, Adriaenssens, Evelien M.
Published in Archives of virology (01.02.2023)
Published in Archives of virology (01.02.2023)
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Journal Article
Recent changes to virus taxonomy ratified by the International Committee on Taxonomy of Viruses (2022)
Walker, Peter J., Siddell, Stuart G., Lefkowitz, Elliot J., Mushegian, Arcady R., Adriaenssens, Evelien M., Alfenas-Zerbini, Poliane, Dempsey, Donald M., Dutilh, Bas E., García, María Laura, Curtis Hendrickson, R., Junglen, Sandra, Krupovic, Mart, Kuhn, Jens H., Lambert, Amy J., Łobocka, Małgorzata, Oksanen, Hanna M., Orton, Richard J., Robertson, David L., Rubino, Luisa, Sabanadzovic, Sead, Simmonds, Peter, Smith, Donald B., Suzuki, Nobuhiro, Van Doorslaer, Koenraad, Vandamme, Anne-Mieke, Varsani, Arvind, Zerbini, Francisco Murilo
Published in Archives of virology (01.11.2022)
Published in Archives of virology (01.11.2022)
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Journal Article
Changes to virus taxonomy and the Statutes ratified by the International Committee on Taxonomy of Viruses (2020)
Walker, Peter J., Siddell, Stuart G., Lefkowitz, Elliot J., Mushegian, Arcady R., Adriaenssens, Evelien M., Dempsey, Donald M., Dutilh, Bas E., Harrach, Balázs, Harrison, Robert L., Hendrickson, R. Curtis, Junglen, Sandra, Knowles, Nick J., Kropinski, Andrew M., Krupovic, Mart, Kuhn, Jens H., Nibert, Max, Orton, Richard J., Rubino, Luisa, Sabanadzovic, Sead, Simmonds, Peter, Smith, Donald B., Varsani, Arvind, Zerbini, Francisco Murilo, Davison, Andrew J.
Published in Archives of virology (01.11.2020)
Published in Archives of virology (01.11.2020)
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Journal Article
Evaluation of the genomic diversity of viruses infecting bacteria, archaea and eukaryotes using a common bioinformatic platform: steps towards a unified taxonomy
Aiewsakun, Pakorn, Adriaenssens, Evelien M, Lavigne, Rob, Kropinski, Andrew M, Simmonds, Peter
Published in Journal of general virology (01.09.2018)
Published in Journal of general virology (01.09.2018)
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Journal Article
Evolution of Salmonella enterica serotype Typhimurium driven by anthropogenic selection and niche adaptation
Bawn, Matt, Alikhan, Nabil-Fareed, Thilliez, Gaëtan, Kirkwood, Mark, Wheeler, Nicole E, Petrovska, Liljana, Dallman, Timothy J, Adriaenssens, Evelien M, Hall, Neil, Kingsley, Robert A
Published in PLoS genetics (08.06.2020)
Published in PLoS genetics (08.06.2020)
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Journal Article
Analysis of Spounaviruses as a Case Study for the Overdue Reclassification of Tailed Phages
Barylski, Jakub, Enault, François, Dutilh, Bas E., Schuller, Margo B.P., Edwards, Robert A., Gillis, Annika, Klumpp, Jochen, Knezevic, Petar, Krupovic, Mart, Kuhn, Jens H., Lavigne, Rob, Oksanen, Hanna M., Sullivan, Matthew B., Jang, Ho Bin, Simmonds, Peter, Aiewsakun, Pakorn, Wittmann, Johannes, Tolstoy, Igor, Brister, J. Rodney, Kropinski, Andrew M., Adriaenssens, Evelien M.
Published in Systematic biology (01.01.2020)
Published in Systematic biology (01.01.2020)
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Journal Article
T4-related bacteriophage LIMEstone isolates for the control of soft rot on potato caused by 'Dickeya solani'
Adriaenssens, Evelien M, Van Vaerenbergh, Johan, Vandenheuvel, Dieter, Dunon, Vincent, Ceyssens, Pieter-Jan, De Proft, Maurice, Kropinski, Andrew M, Noben, Jean-Paul, Maes, Martine, Lavigne, Rob
Published in PloS one (07.03.2012)
Published in PloS one (07.03.2012)
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Journal Article
Phage diversity in One Health
Pye, Hannah V, Krishnamurthi, Revathy, Cook, Ryan, Adriaenssens, Evelien M
Published in Essays in biochemistry (30.10.2024)
Published in Essays in biochemistry (30.10.2024)
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Journal Article
Extensive microbial diversity within the chicken gut microbiome revealed by metagenomics and culture
Gilroy, Rachel, Ravi, Anuradha, Getino, Maria, Pursley, Isabella, Horton, Daniel L, Alikhan, Nabil-Fareed, Baker, Dave, Gharbi, Karim, Hall, Neil, Watson, Mick, Adriaenssens, Evelien M, Foster-Nyarko, Ebenezer, Jarju, Sheikh, Secka, Arss, Antonio, Martin, Oren, Aharon, Chaudhuri, Roy R, La Ragione, Roberto, Hildebrand, Falk, Pallen, Mark J
Published in PeerJ (San Francisco, CA) (06.04.2021)
Published in PeerJ (San Francisco, CA) (06.04.2021)
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Journal Article
Metagenomic analysis of the viral community in Namib Desert hypoliths
Adriaenssens, Evelien M., Van Zyl, Lonnie, De Maayer, Pieter, Rubagotti, Enrico, Rybicki, Ed, Tuffin, Marla, Cowan, Don A.
Published in Environmental microbiology (01.02.2015)
Published in Environmental microbiology (01.02.2015)
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Journal Article
Critical Evaluation of CrAssphage as a Molecular Marker for Human-Derived Wastewater Contamination in the Aquatic Environment
Farkas, Kata, Adriaenssens, Evelien M., Walker, David I., McDonald, James E., Malham, Shelagh K., Jones, Davey L.
Published in Food and environmental virology (01.06.2019)
Published in Food and environmental virology (01.06.2019)
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Journal Article
CoronaHiT: high-throughput sequencing of SARS-CoV-2 genomes
Baker, Dave J, Aydin, Alp, Le-Viet, Thanh, Kay, Gemma L, Rudder, Steven, de Oliveira Martins, Leonardo, Tedim, Ana P, Kolyva, Anastasia, Diaz, Maria, Alikhan, Nabil-Fareed, Meadows, Lizzie, Bell, Andrew, Gutierrez, Ana Victoria, Trotter, Alexander J, Thomson, Nicholas M, Gilroy, Rachel, Griffith, Luke, Adriaenssens, Evelien M, Stanley, Rachael, Charles, Ian G, Elumogo, Ngozi, Wain, John, Prakash, Reenesh, Meader, Emma, Mather, Alison E, Webber, Mark A, Dervisevic, Samir, Page, Andrew J, O'Grady, Justin
Published in Genome medicine (09.02.2021)
Published in Genome medicine (09.02.2021)
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Journal Article
Still Something to Discover: Novel Insights into Escherichia coli Phage Diversity and Taxonomy
Korf, Imke H E, Meier-Kolthoff, Jan P, Adriaenssens, Evelien M, Kropinski, Andrew M, Nimtz, Manfred, Rohde, Manfred, van Raaij, Mark J, Wittmann, Johannes
Published in Viruses (17.05.2019)
Published in Viruses (17.05.2019)
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Journal Article
Guidelines for public database submission of uncultivated virus genome sequences for taxonomic classification
Adriaenssens, Evelien M., Roux, Simon, Brister, J. Rodney, Karsch-Mizrachi, Ilene, Kuhn, Jens H., Varsani, Arvind, Yigang, Tong, Reyes, Alejandro, Lood, Cédric, Lefkowitz, Elliot J., Sullivan, Matthew B., Edwards, Robert A., Simmonds, Peter, Rubino, Luisa, Sabanadzovic, Sead, Krupovic, Mart, Dutilh, Bas E.
Published in Nature biotechnology (01.07.2023)
Published in Nature biotechnology (01.07.2023)
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