Analytical validity of nanopore sequencing for rapid SARS-CoV-2 genome analysis
Bull, Rowena A., Adikari, Thiruni N., Ferguson, James M., Hammond, Jillian M., Stevanovski, Igor, Beukers, Alicia G., Naing, Zin, Yeang, Malinna, Verich, Andrey, Gamaarachchi, Hasindu, Kim, Ki Wook, Luciani, Fabio, Stelzer-Braid, Sacha, Eden, John-Sebastian, Rawlinson, William D., van Hal, Sebastiaan J., Deveson, Ira W.
Published in Nature communications (09.12.2020)
Published in Nature communications (09.12.2020)
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Respiratory viral co-infections among SARS-CoV-2 cases confirmed by virome capture sequencing
Kim, Ki Wook, Deveson, Ira W., Pang, Chi Nam I., Yeang, Malinna, Naing, Zin, Adikari, Thiruni, Hammond, Jillian M., Stevanovski, Igor, Beukers, Alicia G., Verich, Andrey, Yin, Simon, McFarlane, David, Wilkins, Marc R., Stelzer-Braid, Sacha, Bull, Rowena A., Craig, Maria E., van Hal, Sebastiaan J., Rawlinson, William D.
Published in Scientific reports (16.02.2021)
Published in Scientific reports (16.02.2021)
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Dengue NS1 antigen as a marker of severe clinical disease
Paranavitane, Shiran Ajith, Gomes, Laksiri, Kamaladasa, Achala, Adikari, Thiruni N, Wickramasinghe, Nilanka, Jeewandara, Chandima, Shyamali, Narangoda Liyanage Ajantha, Ogg, Graham Stuart, Malavige, Gathsaurie Neelika
Published in BMC infectious diseases (31.10.2014)
Published in BMC infectious diseases (31.10.2014)
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Identification of human progenitors of exhausted CD8+ T cells associated with elevated IFN-γ response in early phase of viral infection
Cai, Curtis, Samir, Jerome, Pirozyan, Mehdi R., Adikari, Thiruni N., Gupta, Money, Leung, Preston, Hughes, Brendan, Van der Byl, Willem, Rizzetto, Simone, Elthala, Auda, Keoshkerian, Elizabeth, Palgen, Jean-Louis, Peters, Timothy, Nguyen, Thi H. O., Louie, Raymond, Kedzierska, Katherine, Gaudieri, Silvana, Bull, Rowena A., Lloyd, Andrew R., Luciani, Fabio
Published in Nature communications (07.12.2022)
Published in Nature communications (07.12.2022)
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Conserved epitopes with high HLA-I population coverage are targets of CD8+ T cells associated with high IFN-γ responses against all dengue virus serotypes
Adikari, Thiruni N., Di Giallonardo, Francesca, Leung, Preston, Grifoni, Alba, Sette, Alex, Weiskopf, Daniela, Bull, Rowena A., Luciani, Fabio
Published in Scientific reports (24.11.2020)
Published in Scientific reports (24.11.2020)
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CAR+ and CAR− T cells share a differentiation trajectory into an NK-like subset after CD19 CAR T cell infusion in patients with B cell malignancies
Louie, Raymond Hall Yip, Cai, Curtis, Samir, Jerome, Singh, Mandeep, Deveson, Ira W., Ferguson, James M., Amos, Timothy G., McGuire, Helen Marie, Gowrishankar, Kavitha, Adikari, Thiruni, Balderas, Robert, Bonomi, Martina, Ruella, Marco, Bishop, David, Gottlieb, David, Blyth, Emily, Micklethwaite, Kenneth, Luciani, Fabio
Published in Nature communications (27.11.2023)
Published in Nature communications (27.11.2023)
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Functionality of dengue virus specific memory T cell responses in individuals who were hospitalized or who had mild or subclinical dengue infection
Jeewandara, Chandima, Adikari, Thiruni N, Gomes, Laksiri, Fernando, Samitha, Fernando, R H, Perera, M K T, Ariyaratne, Dinuka, Kamaladasa, Achala, Salimi, Maryam, Prathapan, Shamini, Ogg, Graham S, Malavige, Gathsaurie Neelika
Published in PLoS neglected tropical diseases (01.04.2015)
Published in PLoS neglected tropical diseases (01.04.2015)
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Single molecule, near full-length genome sequencing of dengue virus
Adikari, Thiruni N., Riaz, Nasir, Sigera, Chathurani, Leung, Preston, Valencia, Braulio M., Barton, Kirston, Smith, Martin A., Bull, Rowena A., Li, Hui, Luciani, Fabio, Weeratunga, Praveen, Thein, Tun-Linn, Lim, Vanessa W. X., Leo, Yee-Sin, Rajapakse, Senaka, Fink, Katja, Lloyd, Andrew R., Fernando, Deepika, Rodrigo, Chaturaka
Published in Scientific reports (23.10.2020)
Published in Scientific reports (23.10.2020)
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Genomic Surveillance of Recent Dengue Outbreaks in Colombo, Sri Lanka
Maduranga, Sachith, Valencia, Braulio Mark, Sigera, Chathurani, Adikari, Thiruni, Weeratunga, Praveen, Fernando, Deepika, Rajapakse, Senaka, Lloyd, Andrew R, Bull, Rowena A, Rodrigo, Chaturaka
Published in Viruses (21.06.2023)
Published in Viruses (21.06.2023)
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Multi-omic profiling in coeliac disease reveals somatic driver mutations in rogue T cell clones
Singh, Manu, Louie, Raymond, Milthopre, Claire, Adikari, Thiruni, Hardy, Melinda, Faulks, Megan, Field, Matt, Ahlenstiel, Golo, Tye-Din, Jason, Luciani, Fabio, Goodnow, Chris C
Published in The Journal of immunology (1950) (01.05.2023)
Published in The Journal of immunology (1950) (01.05.2023)
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CAR +and CAR −T cells differentiate into an NK-like subset that is associated with increased inflammatory cytokines following infusion
Luciani, Fabio, Louie, Raymond Y, Cai, Curtis, Singh, Mandeep, Deveson, Ira, Ferguson, James, Amos, Timothy, McGuire, Helen, Samir, Jerome, Gowrishankar, Kavitha, Adikari, Thiruni, Balderas, Robert, Bishop, David, Gottileb, David, Blyth, Emily, Micklethwaite, Kenneth
Published in JOURNAL OF IMMUNOLOGY (01.05.2023)
Published in JOURNAL OF IMMUNOLOGY (01.05.2023)
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Abstract 882: Harnessing single cell multi-omics data to identify predictors of clinical outcome in CD19 CAR T cell therapy
Louie, Raymond Y., Samir, Jerome, Cai, Curtis, McGuire, Helen, Amos, Tim, Fergsuson, James, Deveson, Ira, Adikari, Thiruni, Bonomi, Martina, Bishop, David, Mason, Christopher E., Balderas, Robert, Ruella, Marco, Singh, Mandeep, Gottlieb, David, Blyth, Emily, Micklethwaite, Ken, Luciani, Fabio
Published in Cancer research (Chicago, Ill.) (22.03.2024)
Published in Cancer research (Chicago, Ill.) (22.03.2024)
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Functionality of Dengue Virus Specific Memory T Cell Responses in Individuals Who Were Hospitalized or Who Had Mild or Subclinical Dengue Infection: e0003673
Jeewandara, Chandima, Adikari, Thiruni N, Gomes, Laksiri, Fernando, Samitha, Fernando, R H, Perera, M KT, Ariyaratne, Dinuka, Kamaladasa, Achala, Salimi, Maryam, Prathapan, Shamini, Ogg, Graham S, Malavige, Gathsaurie Neelika
Published in PLoS neglected tropical diseases (01.04.2015)
Published in PLoS neglected tropical diseases (01.04.2015)
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Single cell multi-omics reveals early elevated function and multiple fates within human progenitor exhausted CD8+ T cells
Luciani, Fabio, Jn, Jerome Samir, Preston Leung Jn, Kedzierska, Katherine, Nguyen, Tho, Lloyd, Andrew, Curtis Cai Jn, Bull, Rowena, Jn, Elizabeth Keoshkerian, Auda Eltahla Jn, Timothy Peters Jn, Gaudieri, Silvana, Money Gupta Jn, Thiruni Adikari Jn, Raymond Louie Jn, Simone Rizzetto Jn, Willem Van Der Byl Jn, Mehdi Rasoli Jn, Jean-Louis Palgen Jn
Published in bioRxiv (11.09.2021)
Published in bioRxiv (11.09.2021)
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Paper
Respiratory viral co-infections among SARS-CoV-2 cases confirmed by virome capture sequencing
Kim, Ki Wook, Deveson, Ira W, Pang, Chi Nam I, Yeang, Malinna, Naing, Zin, Adikari, Thiruni, Hammond, Jillian M, Stevanovski, Igor, Beukers, Alicia G, Verich, Andrey, Yin, Simon, McFarlane, David, Wilkins, Marc R, Stelzer-Braid, Sacha, Bull, Rowena A, Craig, Maria E, van Hal, Sebastiaan J, Rawlinson, William D
Published in Research Square (18.11.2020)
Published in Research Square (18.11.2020)
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Web Resource
Analytical validity of nanopore sequencing for rapid SARS-CoV-2 genome analysis
Bull, Rowena A, Adikari, Thiruni, Ferguson, James M, Hammond, Jillian M, Stevanovski, Igor, Beukers, Alicia G, Naing, Zin, Yeang, Malinna, Verich, Andrey, Gamaarachchi, Hasindu, Kim, Ki Wook, Luciani, Fabio, Stelzer-Braid, Sacha, John-Sebastian, Eden, Rawlinson, William D, Van Hal, Sebastiaan J, Deveson, Ira W
Published in bioRxiv (20.10.2020)
Published in bioRxiv (20.10.2020)
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