Super-resolved spatial transcriptomics by deep data fusion
Bergenstråhle, Ludvig, He, Bryan, Bergenstråhle, Joseph, Abalo, Xesús, Mirzazadeh, Reza, Thrane, Kim, Ji, Andrew L, Andersson, Alma, Larsson, Ludvig, Stakenborg, Nathalie, Boeckxstaens, Guy, Khavari, Paul, Zou, James, Lundeberg, Joakim, Maaskola, Jonas
Published in Nature biotechnology (01.04.2022)
Published in Nature biotechnology (01.04.2022)
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Journal Article
The vertebrate ancestral repertoire of visual opsins, transducin alpha subunits and oxytocin/vasopressin receptors was established by duplication of their shared genomic region in the two rounds of early vertebrate genome duplications
Lagman, David, Ocampo Daza, Daniel, Widmark, Jenny, Abalo, Xesús M, Sundström, Görel, Larhammar, Dan
Published in BMC evolutionary biology (02.11.2013)
Published in BMC evolutionary biology (02.11.2013)
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Journal Article
Proof-of-concept for CRISPR/Cas9 gene editing in human preadipocytes: Deletion of FKBP5 and PPARG and effects on adipocyte differentiation and metabolism
Kamble, Prasad G, Hetty, Susanne, Vranic, Milica, Almby, Kristina, Castillejo-López, Casimiro, Abalo, Xesús M, Pereira, Maria J, Eriksson, Jan W
Published in Scientific reports (29.06.2020)
Published in Scientific reports (29.06.2020)
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Journal Article
Circadian regulation of phosphodiesterase 6 genes in zebrafish differs between cones and rods: Implications for photopic and scotopic vision
Abalo, Xesús M., Lagman, David, Heras, Gabriel, del Pozo, Ana, Eggert, Joel, Larhammar, Dan
Published in Vision research (Oxford) (01.01.2020)
Published in Vision research (Oxford) (01.01.2020)
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Journal Article
The discovAIR project: a roadmap towards the Human Lung Cell Atlas
Luecken, Malte D, Zaragosi, Laure-Emmanuelle, Madissoon, Elo, Sikkema, Lisa, Firsova, Alexandra B, De Domenico, Elena, Kümmerle, Louis, Saglam, Adem, Berg, Marijn, Gay, Aurore C A, Schniering, Janine, Mayr, Christoph H, Abalo, Xesús M, Larsson, Ludvig, Sountoulidis, Alexandros, Teichmann, Sarah, van Eunen, Karen, Koppelman, Gerard H, Saeb-Parsy, Kourosh, Leroy, Sylvie, Powell, Pippa, Sarkans, Ugis, Timens, Wim, Lundeberg, Joakim, van den Berge, Maarten, Nilsson, Mats, Horváth, Peter, Denning, Jessica, Papatheodorou, Irene, Schultze, Joachim, Schiller, Herbert B, Barbry, Pascal, Petoukhov, Ilya, Misharin, Alexander V, Adcock, Ian, von Papen, Michael, Theis, Fabian J, Samakovlis, Christos, Meyer, Kerstin B, Nawijn, Martijn C
Published in The European respiratory journal (01.08.2022)
Published in The European respiratory journal (01.08.2022)
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Journal Article
Spatially resolved transcriptomic profiling of degraded and challenging fresh frozen samples
Mirzazadeh, Reza, Andrusivova, Zaneta, Larsson, Ludvig, Newton, Phillip T, Galicia, Leire Alonso, Abalo, Xesús M, Avijgan, Mahtab, Kvastad, Linda, Denadai-Souza, Alexandre, Stakenborg, Nathalie, Firsova, Alexandra B, Shamikh, Alia, Jurek, Aleksandra, Schultz, Niklas, Nistér, Monica, Samakovlis, Christos, Boeckxstaens, Guy, Lundeberg, Joakim
Published in Nature communications (2023)
Published in Nature communications (2023)
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Journal Article
A versatile tissue-rolling technique for spatial-omics analyses of the entire murine gastrointestinal tract
Monasterio, Gustavo, Morales, Rodrigo A, Bejarano, David A, Abalo, Xesús M, Fransson, Jennifer, Larsson, Ludvig, Schlitzer, Andreas, Lundeberg, Joakim, Das, Srustidhar, Villablanca, Eduardo J
Published in Nature protocols (21.06.2024)
Published in Nature protocols (21.06.2024)
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Journal Article
Expansion of transducin subunit gene families in early vertebrate tetraploidizations
Lagman, David, Sundström, Görel, Ocampo Daza, Daniel, Abalo, Xesús M., Larhammar, Dan
Published in Genomics (San Diego, Calif.) (01.10.2012)
Published in Genomics (San Diego, Calif.) (01.10.2012)
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Journal Article
Single-Cell and Spatial Transcriptomic Analysis of Human Skin Delineates Intercellular Communication and Pathogenic Cells
Thrane, Kim, Winge, Mårten C.G., Wang, Hongyu, Chen, Larry, Guo, Margaret G., Andersson, Alma, Abalo, Xesús M., Yang, Xue, Kim, Daniel S., Longo, Sophia K., Soong, Brian Y., Meyers, Jordan M., Reynolds, David L., McGeever, Aaron, Demircioglu, Deniz, Hasson, Dan, Mirzazadeh, Reza, Rubin, Adam J., Bae, Gordon H., Karkanias, Jim, Rieger, Kerri, Lundeberg, Joakim, Ji, Andrew L.
Published in Journal of investigative dermatology (01.11.2023)
Published in Journal of investigative dermatology (01.11.2023)
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Journal Article
A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung
Sountoulidis, Alexandros, Marco Salas, Sergio, Braun, Emelie, Avenel, Christophe, Bergenstråhle, Joseph, Theelke, Jonas, Vicari, Marco, Czarnewski, Paulo, Liontos, Andreas, Abalo, Xesus, Andrusivová, Žaneta, Mirzazadeh, Reza, Asp, Michaela, Li, Xiaofei, Hu, Lijuan, Sariyar, Sanem, Martinez Casals, Anna, Ayoglu, Burcu, Firsova, Alexandra, Michaëlsson, Jakob, Lundberg, Emma, Wählby, Carolina, Sundström, Erik, Linnarsson, Sten, Lundeberg, Joakim, Nilsson, Mats, Samakovlis, Christos
Published in Nature cell biology (01.02.2023)
Published in Nature cell biology (01.02.2023)
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Journal Article
Macrophage-derived secretome is sufficient to confer olanzapine-mediated insulin resistance in human adipocytes
Dipta, Priya, Sarsenbayeva, Assel, Shmuel, Miriam, Forno, Francesca, Eriksson, Jan W., Pereira, Maria J., Abalo, Xesús M., Wabitsch, Martin, Thaysen-Andersen, Morten, Tirosh, Boaz
Published in Comprehensive Psychoneuroendocrinology (Online) (01.08.2021)
Published in Comprehensive Psychoneuroendocrinology (Online) (01.08.2021)
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Journal Article
Presence of glutamate, glycine, and γ-aminobutyric acid in the retina of the larval sea lamprey: Comparative immunohistochemical study of classical neurotransmitters in larval and postmetamorphic retinas
Villar-Cerviño, Verona, Abalo, Xesús M., Villar-Cheda, Begoña, Meléndez-Ferro, Miguel, Pérez-Costas, Emma, Holstein, Gay R., Martinelli, Giorgio P., Rodicio, María Celina, Anadón, Ramón
Published in Journal of comparative neurology (1911) (10.12.2006)
Published in Journal of comparative neurology (1911) (10.12.2006)
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Journal Article
Development of the dopamine-immunoreactive system in the central nervous system of the sea lamprey
Abalo, Xesús M., Villar-Cheda, Begoña, Anadón, Ramón, Rodicio, M. Celina
Published in Brain research bulletin (15.09.2005)
Published in Brain research bulletin (15.09.2005)
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