The international glycan repository GlyTouCan version 3.0
Fujita, Akihiro, Aoki, Nobuyuki P, Shinmachi, Daisuke, Matsubara, Masaaki, Tsuchiya, Shinichiro, Shiota, Masaaki, Ono, Tamiko, Yamada, Issaku, Aoki-Kinoshita, Kiyoko F
Published in Nucleic acids research (08.01.2021)
Published in Nucleic acids research (08.01.2021)
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Journal Article
Systems glycomics of adult zebrafish identifies organ-specific sialylation and glycosylation patterns
Yamakawa, Nao, Vanbeselaere, Jorick, Chang, Lan-Yi, Yu, Shin-Yi, Ducrocq, Lucie, Harduin-Lepers, Anne, Kurata, Junichi, Aoki-Kinoshita, Kiyoko F., Sato, Chihiro, Khoo, Kay-Hooi, Kitajima, Ken, Guerardel, Yann
Published in Nature communications (07.11.2018)
Published in Nature communications (07.11.2018)
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Journal Article
Symbol Nomenclature for Graphical Representations of Glycans
Varki, Ajit, Cummings, Richard D, Aebi, Markus, Packer, Nicole H, Seeberger, Peter H, Esko, Jeffrey D, Stanley, Pamela, Hart, Gerald, Darvill, Alan, Kinoshita, Taroh, Prestegard, James J, Schnaar, Ronald L, Freeze, Hudson H, Marth, Jamey D, Bertozzi, Carolyn R, Etzler, Marilynn E, Frank, Martin, Vliegenthart, Johannes Fg, Lütteke, Thomas, Perez, Serge, Bolton, Evan, Rudd, Pauline, Paulson, James, Kanehisa, Minoru, Toukach, Philip, Aoki-Kinoshita, Kiyoko F, Dell, Anne, Narimatsu, Hisashi, York, William, Taniguchi, Naoyuki, Kornfeld, Stuart
Published in Glycobiology (Oxford) (01.12.2015)
Published in Glycobiology (Oxford) (01.12.2015)
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Journal Article
The Lectin Frontier Database (LfDB), and data generation based on frontal affinity chromatography
Hirabayashi, Jun, Tateno, Hiroaki, Shikanai, Toshihide, Aoki-Kinoshita, Kiyoko F, Narimatsu, Hisashi
Published in Molecules (08.01.2015)
Published in Molecules (08.01.2015)
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Journal Article
Book Review
Global mapping of glycosylation pathways in human-derived cells
Huang, Yi-Fan, Aoki, Kazuhiro, Akase, Sachiko, Ishihara, Mayumi, Liu, Yi-Shi, Yang, Ganglong, Kizuka, Yasuhiko, Mizumoto, Shuji, Tiemeyer, Michael, Gao, Xiao-Dong, Aoki-Kinoshita, Kiyoko F., Fujita, Morihisa
Published in Developmental cell (19.04.2021)
Published in Developmental cell (19.04.2021)
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Journal Article
The GlyCosmos Portal: a unified and comprehensive web resource for the glycosciences
Yamada, Issaku, Shiota, Masaaki, Shinmachi, Daisuke, Ono, Tamiko, Tsuchiya, Shinichiro, Hosoda, Masae, Fujita, Akihiro, Aoki, Nobuyuki P., Watanabe, Yu, Fujita, Noriaki, Angata, Kiyohiko, Kaji, Hiroyuki, Narimatsu, Hisashi, Okuda, Shujiro, Aoki-Kinoshita, Kiyoko F.
Published in Nature methods (01.07.2020)
Published in Nature methods (01.07.2020)
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Journal Article
GlyGen: Computational and Informatics Resources for Glycoscience
York, William S, Mazumder, Raja, Ranzinger, Rene, Edwards, Nathan, Kahsay, Robel, Aoki-Kinoshita, Kiyoko F, Campbell, Matthew P, Cummings, Richard D, Feizi, Ten, Martin, Maria, Natale, Darren A, Packer, Nicolle H, Woods, Robert J, Agarwal, Gaurav, Arpinar, Sena, Bhat, Sanath, Blake, Judith, Castro, Leyla Jael Garcia, Fochtman, Brian, Gildersleeve, Jeffrey, Goldman, Radoslav, Holmes, Xavier, Jain, Vinamra, Kulkarni, Sujeet, Mahadik, Rupali, Mehta, Akul, Mousavi, Reza, Nakarakommula, Sandeep, Navelkar, Rahi, Pattabiraman, Nagarajan, Pierce, Michael J, Ross, Karen, Vasudev, Preethi, Vora, Jeet, Williamson, Tatiana, Zhang, Wenjin
Published in Glycobiology (Oxford) (28.01.2020)
Published in Glycobiology (Oxford) (28.01.2020)
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Journal Article
Functional glyco-metagenomics elucidates the role of glycan-related genes in environments
Takihara, Hayato, Miura, Nobuaki, Aoki-Kinoshita, Kiyoko F, Okuda, Shujiro
Published in BMC bioinformatics (18.10.2021)
Published in BMC bioinformatics (18.10.2021)
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Journal Article
SugarDrawer: A Web-Based Database Search Tool with Editing Glycan Structures
Tsuchiya, Shinichiro, Matsubara, Masaaki, Aoki-Kinoshita, Kiyoko F, Yamada, Issaku
Published in Molecules (Basel, Switzerland) (25.11.2021)
Published in Molecules (Basel, Switzerland) (25.11.2021)
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Journal Article
Towards a standardized bioinformatics infrastructure for N- and O-glycomics
Rojas-Macias, Miguel A., Mariethoz, Julien, Andersson, Peter, Jin, Chunsheng, Venkatakrishnan, Vignesh, Aoki, Nobuyuki P., Shinmachi, Daisuke, Ashwood, Christopher, Madunic, Katarina, Zhang, Tao, Miller, Rebecca L., Horlacher, Oliver, Struwe, Weston B., Watanabe, Yu, Okuda, Shujiro, Levander, Fredrik, Kolarich, Daniel, Rudd, Pauline M., Wuhrer, Manfred, Kettner, Carsten, Packer, Nicolle H., Aoki-Kinoshita, Kiyoko F., Lisacek, Frédérique, Karlsson, Niclas G.
Published in Nature communications (22.07.2019)
Published in Nature communications (22.07.2019)
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Journal Article
Development and application of an algorithm to compute weighted multiple glycan alignments
Hosoda, Masae, Akune, Yukie, Aoki-Kinoshita, Kiyoko F
Published in Bioinformatics (Oxford, England) (01.05.2017)
Published in Bioinformatics (Oxford, England) (01.05.2017)
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Journal Article
GALAXY ver3: updated web application for glycosylation profiling based on 3D HPLC map
Yagi, Hirokazu, Amagasa, Eijiro, Shiota, Masaaki, Yamada, Issaku, Aoki-Kinoshita, Kiyoko F, Kato, Koichi
Published in Glycobiology (Oxford) (13.07.2022)
Published in Glycobiology (Oxford) (13.07.2022)
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Journal Article
An N-glycome tissue atlas of 15 human normal and cancer tissue types determined by MALDI-imaging mass spectrometry
Wallace, Elizabeth N., West, Connor A., McDowell, Colin T., Lu, Xiaowei, Bruner, Evelyn, Mehta, Anand S., Aoki-Kinoshita, Kiyoko F., Angel, Peggi M., Drake, Richard R.
Published in Scientific reports (04.01.2024)
Published in Scientific reports (04.01.2024)
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Journal Article
MCAW-DB: A glycan profile database capturing the ambiguity of glycan recognition patterns
Hosoda, Masae, Takahashi, Yushi, Shiota, Masaaki, Shinmachi, Daisuke, Inomoto, Renji, Higashimoto, Shinichi, Aoki-Kinoshita, Kiyoko F.
Published in Carbohydrate research (15.07.2018)
Published in Carbohydrate research (15.07.2018)
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Journal Article
Computational Modeling of O -Linked Glycan Biosynthesis in CHO Cells
Kouka, Thukaa, Akase, Sachiko, Sogabe, Isami, Jin, Chunsheng, Karlsson, Niclas G, Aoki-Kinoshita, Kiyoko F
Published in Molecules (Basel, Switzerland) (08.03.2022)
Published in Molecules (Basel, Switzerland) (08.03.2022)
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Journal Article
Development of an integrated and inferenceable RDF database of glycan, pathogen and disease resources
Arakawa, Koichi, Ono, Tamiko, Aoki-Kinoshita, Kiyoko F., Yamamoto, Yasunori
Published in Scientific data (06.09.2023)
Published in Scientific data (06.09.2023)
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Journal Article