Bacteria, phages and pigs: the effects of in-feed antibiotics on the microbiome at different gut locations
Looft, Torey, Allen, Heather K, Cantarel, Brandi L, Levine, Uri Y, Bayles, Darrell O, Alt, David P, Henrissat, Bernard, Stanton, Thaddeus B
Published in The ISME Journal (01.08.2014)
Published in The ISME Journal (01.08.2014)
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In-feed antibiotic effects on the swine intestinal microbiome
Looft, Torey, Johnson, Timothy A., Allen, Heather K., Bayles, Darrell O., Alt, David P., Stedtfeld, Robert D., Sul, Woo Jun, Stedtfeld, Tiffany M., Chai, Benli, Cole, James R., Hashsham, Syed A., Tiedje, James M., Stanton, Thad B.
Published in Proceedings of the National Academy of Sciences - PNAS (31.01.2012)
Published in Proceedings of the National Academy of Sciences - PNAS (31.01.2012)
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Journal Article
Transcriptomic profiles of Mannheimia haemolytica planktonic and biofilm associated cells
Ma, Hao, Alt, David P, Falkenberg, Shollie M, Briggs, Robert E, Tatum, Fred M, Clawson, Michael L, Casas, Eduardo, Dassanayake, Rohana P
Published in PloS one (08.02.2024)
Published in PloS one (08.02.2024)
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Comparison of Two Multilocus Sequence Typing Schemes for Mycoplasma bovis and Revision of the PubMLST Reference Method
Register, Karen B, Lysnyansky, Inna, Jelinski, Murray D, Boatwright, William D, Waldner, Matthew, Bayles, Darrell O, Pilo, Paola, Alt, David P
Published in Journal of clinical microbiology (26.05.2020)
Published in Journal of clinical microbiology (26.05.2020)
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A live attenuated-vaccine model confers cross-protective immunity against different species of the Leptospira genus
Wunder, Elsio A, Adhikarla, Haritha, Hamond, Camila, Owers Bonner, Katharine A, Liang, Li, Rodrigues, Camila B, Bisht, Vimla, Nally, Jarlath E, Alt, David P, Reis, Mitermayer G, Diggle, Peter J, Felgner, Philip L, Ko, Albert
Published in eLife (26.01.2021)
Published in eLife (26.01.2021)
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Journal Article
Carbadox has both temporary and lasting effects on the swine gut microbiota
Looft, Torey, Allen, Heather K, Casey, Thomas A, Alt, David P, Stanton, Thaddeus B
Published in Frontiers in microbiology (10.06.2014)
Published in Frontiers in microbiology (10.06.2014)
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Journal Article
Shifts in the nasal microbiota of swine in response to different dosing regimens of oxytetracycline administration
Mou, Kathy T., Allen, Heather K., Alt, David P., Trachsel, Julian, Hau, Samantha J., Coetzee, Johann F., Holman, Devin B., Kellner, Steven, Loving, Crystal L., Brockmeier, Susan L.
Published in Veterinary microbiology (01.10.2019)
Published in Veterinary microbiology (01.10.2019)
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Distinct transcriptional profiles of Leptospira borgpetersenii serovar Hardjo strains JB197 and HB203 cultured at different temperatures
Putz, Ellie J, Sivasankaran, Sathesh K, Fernandes, Luis G V, Brunelle, Brian, Lippolis, John D, Alt, David P, Bayles, Darrell O, Hornsby, Richard L, Nally, Jarlath E
Published in PLoS neglected tropical diseases (07.04.2021)
Published in PLoS neglected tropical diseases (07.04.2021)
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Genome reduction in Leptospira borgpetersenii reflects limited transmission potential
Bulach, D.M, Zuerner, R.L, Wilson, P, Seemann, T, McGrath, A, Cullen, P.A, Davis, J, Johnson, M, Kuczek, E, Alt, D.P
Published in Proceedings of the National Academy of Sciences - PNAS (26.09.2006)
Published in Proceedings of the National Academy of Sciences - PNAS (26.09.2006)
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Assessing rodents as carriers of pathogenic Leptospira species in the U.S. Virgin Islands and their risk to animal and public health
Hamond, Camila, Browne, A Springer, de Wilde, Leah H, Hornsby, Richard L, LeCount, Karen, Anderson, Tammy, Stuber, Tod, Cranford, Hannah M, Browne, Stephanie K, Blanchard, Gerard, Horner, David, Taylor, Marissa L, Evans, Michael, Angeli, Nicole F, Roth, Joseph, Bisgard, Kristine M, Salzer, Johanna S, Schafer, Ilana J, Ellis, Brett R, Alt, David P, Schlater, Linda, Nally, Jarlath E, Ellis, Esther M
Published in Scientific reports (21.01.2022)
Published in Scientific reports (21.01.2022)
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Journal Article
A pseudomolecule assembly of the Rocky Mountain elk genome
Masonbrink, Rick E, Alt, David, Bayles, Darrell O, Boggiatto, Paola, Edwards, William, Tatum, Fred, Williams, Jeffrey, Wilson-Welder, Jennifer, Zimin, Aleksey, Severin, Andrew, Olsen, Steven
Published in PloS one (28.04.2021)
Published in PloS one (28.04.2021)
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Genome sequencing of ovine isolates of Mycobacterium avium subspecies paratuberculosis offers insights into host association
Bannantine, John P, Wu, Chia-wei, Hsu, Chungyi, Zhou, Shiguo, Schwartz, David C, Bayles, Darrell O, Paustian, Michael L, Alt, David P, Sreevatsan, Srinand, Kapur, Vivek, Talaat, Adel M
Published in BMC genomics (12.03.2012)
Published in BMC genomics (12.03.2012)
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Some like it hot, some like it cold; proteome comparison of Leptospira borgpetersenii serovar Hardjo strains propagated at different temperatures
Putz, Ellie J., Fernandes, Luis G.V., Sivasankaran, Sathesh K., Bayles, Darrell O., Alt, David P., Lippolis, John D., Nally, Jarlath E.
Published in Journal of proteomics (30.06.2022)
Published in Journal of proteomics (30.06.2022)
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