Pol II phosphorylation regulates a switch between transcriptional and splicing condensates
Guo, Yang Eric, Manteiga, John C, Henninger, Jonathan E, Sabari, Benjamin R, Dall'Agnese, Alessandra, Hannett, Nancy M, Spille, Jan-Hendrik, Afeyan, Lena K, Zamudio, Alicia V, Shrinivas, Krishna, Abraham, Brian J, Boija, Ann, Decker, Tim-Michael, Rimel, Jenna K, Fant, Charli B, Lee, Tong Ihn, Cisse, Ibrahim I, Sharp, Phillip A, Taatjes, Dylan J, Young, Richard A
Published in Nature (London) (01.08.2019)
Published in Nature (London) (01.08.2019)
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Partitioning of cancer therapeutics in nuclear condensates
Klein, Isaac A, Boija, Ann, Afeyan, Lena K, Hawken, Susana Wilson, Fan, Mengyang, Dall'Agnese, Alessandra, Oksuz, Ozgur, Henninger, Jonathan E, Shrinivas, Krishna, Sabari, Benjamin R, Sagi, Ido, Clark, Victoria E, Platt, Jesse M, Kar, Mrityunjoy, McCall, Patrick M, Zamudio, Alicia V, Manteiga, John C, Coffey, Eliot L, Li, Charles H, Hannett, Nancy M, Guo, Yang Eric, Decker, Tim-Michael, Lee, Tong Ihn, Zhang, Tinghu, Weng, Jing-Ke, Taatjes, Dylan J, Chakraborty, Arup, Sharp, Phillip A, Chang, Young Tae, Hyman, Anthony A, Gray, Nathanael S, Young, Richard A
Published in Science (American Association for the Advancement of Science) (19.06.2020)
Published in Science (American Association for the Advancement of Science) (19.06.2020)
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High-resolution specificity profiling and off-target prediction for site-specific DNA recombinases
Bessen, Jeffrey L, Afeyan, Lena K, Dančík, Vlado, Koblan, Luke W, Thompson, David B, Leichner, Chas, Clemons, Paul A, Liu, David R
Published in Nature communications (26.04.2019)
Published in Nature communications (26.04.2019)
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Addendum: High-resolution specificity profiling and off-target prediction for site-specific DNA recombinases
Bessen, Jeffrey L, Afeyan, Lena K, Dančík, Vlado, Koblan, Luke W, Thompson, David B, Leichner, Chas, Clemons, Paul A, Liu, David R
Published in Nature communications (02.07.2019)
Published in Nature communications (02.07.2019)
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Transcription Factors Activate Genes through the Phase-Separation Capacity of Their Activation Domains
Boija, Ann, Klein, Isaac A., Sabari, Benjamin R., Dall’Agnese, Alessandra, Coffey, Eliot L., Zamudio, Alicia V., Li, Charles H., Shrinivas, Krishna, Manteiga, John C., Hannett, Nancy M., Abraham, Brian J., Afeyan, Lena K., Guo, Yang E., Rimel, Jenna K., Fant, Charli B., Schuijers, Jurian, Lee, Tong Ihn, Taatjes, Dylan J., Young, Richard A.
Published in Cell (13.12.2018)
Published in Cell (13.12.2018)
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Mediator Condensates Localize Signaling Factors to Key Cell Identity Genes
Zamudio, Alicia V., Dall’Agnese, Alessandra, Henninger, Jonathan E., Manteiga, John C., Afeyan, Lena K., Hannett, Nancy M., Coffey, Eliot L., Li, Charles H., Oksuz, Ozgur, Sabari, Benjamin R., Boija, Ann, Klein, Isaac A., Hawken, Susana W., Spille, Jan-Hendrik, Decker, Tim-Michael, Cisse, Ibrahim I., Abraham, Brian J., Lee, Tong I., Taatjes, Dylan J., Schuijers, Jurian, Young, Richard A.
Published in Molecular cell (05.12.2019)
Published in Molecular cell (05.12.2019)
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MeCP2 links heterochromatin condensates and neurodevelopmental disease
Li, Charles H, Coffey, Eliot L, Dall'Agnese, Alessandra, Hannett, Nancy M, Tang, Xin, Henninger, Jonathan E, Platt, Jesse M, Oksuz, Ozgur, Zamudio, Alicia V, Afeyan, Lena K, Schuijers, Jurian, Liu, X Shawn, Markoulaki, Styliani, Lungjangwa, Tenzin, LeRoy, Gary, Svoboda, Devon S, Wogram, Emile, Lee, Tong Ihn, Jaenisch, Rudolf, Young, Richard A
Published in Nature (London) (15.10.2020)
Published in Nature (London) (15.10.2020)
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Genetic variation associated with condensate dysregulation in disease
Banani, Salman F, Afeyan, Lena K, Hawken, Susana W, Henninger, Jonathan E, Dall'Agnese, Alessandra, Clark, Victoria E, Platt, Jesse M, Oksuz, Ozgur, Hannett, Nancy M, Sagi, Ido, Lee, Tong Ihn, Young, Richard A
Published in Developmental cell (25.07.2022)
Published in Developmental cell (25.07.2022)
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The transcription factor PAX8 promotes angiogenesis in ovarian cancer through interaction with SOX17
Chaves-Moreira, Daniele, Mitchell, Marilyn A, Arruza, Cristina, Rawat, Priyanka, Sidoli, Simone, Nameki, Robbin, Reddy, Jessica, Corona, Rosario I, Afeyan, Lena K, Klein, Isaac A, Ma, Sisi, Winterhoff, Boris, Konecny, Gottfried E, Garcia, Benjamin A, Brady, Donita C, Lawrenson, Kate, Morin, Patrice J, Drapkin, Ronny
Published in Science signaling (05.04.2022)
Published in Science signaling (05.04.2022)
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Predicting master transcription factors from pan-cancer expression data
Reddy, Jessica, Fonseca, Marcos A S, Corona, Rosario I, Nameki, Robbin, Segato Dezem, Felipe, Klein, Isaac A, Chang, Heidi, Chaves-Moreira, Daniele, Afeyan, Lena K, Malta, Tathiane M, Lin, Xianzhi, Abbasi, Forough, Font-Tello, Alba, Sabedot, Thais, Cejas, Paloma, Rodríguez-Malavé, Norma, Seo, Ji-Heui, Lin, De-Chen, Matulonis, Ursula, Karlan, Beth Y, Gayther, Simon A, Pasaniuc, Bogdan, Gusev, Alexander, Noushmehr, Houtan, Long, Henry, Freedman, Matthew L, Drapkin, Ronny, Young, Richard A, Abraham, Brian J, Lawrenson, Kate
Published in Science advances (26.11.2021)
Published in Science advances (26.11.2021)
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응축물을 조절하여 유전자 전사를 조절하기 위한 방법 및 분석
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Year of Publication 14.06.2021
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Year of Publication 14.06.2021
Patent
Abstract 2615: Systematic approaches to predict oncogenic transcriptional regulatory circuitries identify important nodes in high-grade serous ovarian cancer
Abraham, Brian J., Reddy, Jessica, Fonseca, Marcos A., Klein, Isaac A., Afeyan, Lena K., Corona, Rosario I., Cejas, Paloma, Segato, Felipe, Karlan, Beth Y., Gayther, Simon A., Freedman, Matthew L., Noushmehr, Houtan, Brown, Myles, Matulonis, Ursula A., Lawrenson, Kate, Young, Richard A.
Published in Cancer research (Chicago, Ill.) (01.07.2019)
Published in Cancer research (Chicago, Ill.) (01.07.2019)
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METHODS AND ASSAYS FOR MODULATING GENE TRANSCRIPTION BY MODULATING CONDENSATES
Zamudio, Alicia V, Weintraub, Abraham S, Lee, Tong Ihn, Boija, Ann, Coffey, Eliot, Abraham, Brian J, Li, Charles H, Afeyan, Lena K, Sabari, Benjamin R, Schuijers, Jurian, Hannett, Nancy M, Dall'Agnese, Alessandra, Young, Richard A, Oksuz, Ozgur, Sharp, Phillip A, Chakraborty, Arup K, Guo, Yang E, Klein, Isaac, Day, Daniel S, Manteiga, John C, Shrinivas, Krishna, Henninger, Jonathan E
Year of Publication 21.04.2022
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Year of Publication 21.04.2022
Patent
METHODS AND ASSAYS FOR MODULATING GENE TRANSCRIPTION BY MODULATING CONDENSATES
WEINTRAUB, Abraham S, HENNINGER, Jonathan E, DALL'AGNESE, Alessandra, SHRINIVAS, Krishna, ZAMUDIO, Alicia V, KLEIN, Isaac, CHAKRABORTY, Arup K, MANTEIGA, John C, ABRAHAM, Brian J, BOIJA, Ann, LEE, Tong Ihn, YOUNG, Richard A, AFEYAN, Lena K, SCHUIJERS, Jurian, SHARP, Phillip A, SABARI, Benjamin R, HANNETT, Nancy M, LI, Charles H, GUO, Yang E, OKSUZ, Ozgur, COFFEY, Eliot, DAY, Daniel S
Year of Publication 05.01.2022
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Year of Publication 05.01.2022
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METHODS AND ASSAYS FOR MODULATING GENE TRANSCRIPTION BY MODULATING CONDENSATES
WEINTRAUB, Abraham S, HENNINGER, Jonathan E, DALL'AGNESE, Alessandra, SHRINIVAS, Krishna, ZAMUDIO, Alicia V, KLEIN, Isaac, CHAKRABORTY, Arup K, MANTEIGA, John C, ABRAHAM, Brian J, BOIJA, Ann, LEE, Tong Ihn, YOUNG, Richard A, AFEYAN, Lena K, SCHUIJERS, Jurian, SHARP, Phillip A, SABARI, Benjamin R, HANNETT, Nancy M, LI, Charles H, GUO, Yang E, OKSUZ, Ozgur, COFFEY, Eliot, DAY, Daniel S
Year of Publication 27.01.2021
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Year of Publication 27.01.2021
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Methods and assays for modulating gene transcription by modulating condensates
WEINTRAUB, Abraham S, HENNINGER, Jonathan E, DALL'AGNESE, Alessandra, SHRINIVAS, Krishna, ZAMUDIO, Alicia V, KLEIN, Isaac, CHAKRABORTY, Arup K, MANTEIGA, John C, ABRAHAM, Brian J, BOIJA, Ann, LEE, Tong Ihn, YOUNG, Richard A, AFEYAN, Lena K, SCHUIJERS, Jurian, SHARP, Phillip A, SABARI, Benjamin R, HANNETT, Nancy M, LI, Charles H, GUO, Yang E, OKSUZ, Ozgur, COFFEY, Eliot, DAY, Daniel S
Year of Publication 05.11.2020
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Year of Publication 05.11.2020
Patent
METHODS AND ASSAYS FOR MODULATING GENE TRANSCRIPTION BY MODULATING CONDENSATES
WEINTRAUB, Abraham S, HENNINGER, Jonathan E, DALL'AGNESE, Alessandra, SHRINIVAS, Krishna, ZAMUDIO, Alicia V, KLEIN, Isaac, CHAKRABORTY, Arup K, MANTEIGA, John C, ABRAHAM, Brian J, BOIJA, Ann, LEE, Tong Ihn, YOUNG, Richard A, AFEYAN, Lena K, SCHUIJERS, Jurian, SHARP, Phillip A, SABARI, Benjamin R, HANNETT, Nancy M, LI, Charles H, GUO, Yang E, OKSUZ, Ozgur, COFFEY, Eliot, DAY, Daniel S
Year of Publication 29.10.2020
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Year of Publication 29.10.2020
Patent
METHODS AND ASSAYS FOR MODULATING GENE TRANSCRIPTION BY MODULATING CONDENSATES
WEINTRAUB, Abraham S, HENNINGER, Jonathan E, DALL'AGNESE, Alessandra, SHRINIVAS, Krishna, ZAMUDIO, Alicia V, KLEIN, Isaac, CHAKRABORTY, Arup K, MANTEIGA, John C, ABRAHAM, Brian J, BOIJA, Ann, LEE, Tong Ihn, YOUNG, Richard A, AFEYAN, Lena K, SCHUIJERS, Jurian, SHARP, Phillip A, SABARI, Benjamin R, HANNETT, Nancy M, LI, Charles H, GUO, Yang E, OKSUZ, Ozgur, COFFEY, Eliot, DAY, Daniel S
Year of Publication 31.10.2019
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Year of Publication 31.10.2019
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METHODS AND ASSAYS FOR MODULATING GENE TRANSCRIPTION BY MODULATING CONDENSATES
LEE, TONG IHN, LI, CHARLES H, MANTEIGA, JOHN C, DAY, DANIEL S, SABARI, BENJAMIN R, ABRAHAM, BRIAN J, OKSUZ, OZGUR, AFEYAN, LENA K, SHRINIVAS, KRISHNA, ZAMUDIO, ALICIA V, HENNINGER, JONATHAN E, BOIJA, ANN, CHAKRABORTY, ARUP K, COFFEY, ELIOT, GUO, YANG E, WEINTRAUB, ABRAHAM S, YOUNG, RICHARD A, DALL'AGNESE, ALESSANDRA, KLEIN, ISAAC, HANNETT, NANCY M, SHARP, PHILLIP A, SCHUIJERS, JURIAN
Year of Publication 26.09.2019
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Year of Publication 26.09.2019
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METHODS AND ASSAYS FOR MODULATING GENE TRANSCRIPTION BY MODULATING CONDENSATES
WEINTRAUB, Abraham S, HENNINGER, Jonathan E, DALL'AGNESE, Alessandra, SHRINIVAS, Krishna, ZAMUDIO, Alicia V, KLEIN, Isaac, CHAKRABORTY, Arup K, MANTEIGA, John C, ABRAHAM, Brian J, BOIJA, Ann, LEE, Tong Ihn, YOUNG, Richard A, AFEYAN, Lena K, SCHUIJERS, Jurian, SHARP, Phillip A, SABARI, Benjamin R, HANNETT, Nancy M, LI, Charles H, GUO, Yang E, OKSUZ, Ozgur, COFFEY, Eliot, DAY, Daniel S
Year of Publication 26.09.2019
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Year of Publication 26.09.2019
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