SAIS-OPT: On the characterization and optimization of the SA-IS algorithm for suffix array construction
Timoshevskaya, Nataliya, Wu-chun Feng
Published in 2014 IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences (ICCABS) (01.06.2014)
Published in 2014 IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences (ICCABS) (01.06.2014)
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Conference Proceeding
EpiSpec: A formal specification language for parameterized agent-based models against epidemiological ground truth
Hussain, Faraz, Ramanathan, Arvind, Pullum, Laura L., Jha, Sumit K.
Published in 2014 IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences (ICCABS) (01.06.2014)
Published in 2014 IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences (ICCABS) (01.06.2014)
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Conference Proceeding
VGA: A method for viral quasispecies assembly from ultra-deep sequencing data
Mangul, Serghei, Wu, Nicholas C., Mancuso, Nicholas, Zelikovsky, Alex, Ren Sun, Eskin, Eleazar
Published in 2014 IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences (ICCABS) (01.06.2014)
Published in 2014 IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences (ICCABS) (01.06.2014)
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Conference Proceeding
Structural vs. functional mechanisms of duplicate gene loss following whole genome doubling
Sankoff, David, Baoyong Wang, Chunfang Zheng, Fernando Buen Abad Najar, Carlos
Published in 2014 IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences (ICCABS) (01.06.2014)
Published in 2014 IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences (ICCABS) (01.06.2014)
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Conference Proceeding
A weighted classification model for peptide identification
Xijun Liang, Zhonghang Xia, Xinnan Niu, Link, Andrew
Published in 2014 IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences (ICCABS) (01.06.2014)
Published in 2014 IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences (ICCABS) (01.06.2014)
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Conference Proceeding
Detection of genetic relatedness between viral samples using EM-based clustering of next-generation sequencing data
Skums, Pavel, Artyomenko, Alexander, Glebova, Olga, Zelikovsky, Alex, Campo, David S., Dimitrova, Zoya, Khudyakov, Yury
Published in 2014 IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences (ICCABS) (01.06.2014)
Published in 2014 IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences (ICCABS) (01.06.2014)
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Conference Proceeding
Identification of protein interaction methods from biomedical literature
Jhamb, Deepali, Krishnan, Anand, Palakal, Meelia, Pandit, Yogesh, Palakal, Mathew J., Duraiswamy, Premkumar
Published in 2014 IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences (ICCABS) (01.06.2014)
Published in 2014 IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences (ICCABS) (01.06.2014)
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Conference Proceeding
SILP3: Maximum likelihood approach to scaffolding
Mandric, Igor, Lindsay, James, Mandoiu, Ion, Zelikovsky, Alex
Published in 2014 IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences (ICCABS) (01.06.2014)
Published in 2014 IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences (ICCABS) (01.06.2014)
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Conference Proceeding
Reconstruction of influenza a virus variants from PacBio reads
Artyomenko, Alexander, Mangul, Serghei, Wu, Nicholas C., Eskin, Eleazar, Ren Sun, Zelikovsky, Alex
Published in 2014 IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences (ICCABS) (01.06.2014)
Published in 2014 IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences (ICCABS) (01.06.2014)
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Conference Proceeding
An SVM-based approach for discovering splicing junctions with RNA-Seq
Chong Chu, Yufeng Wu
Published in 2014 IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences (ICCABS) (01.06.2014)
Published in 2014 IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences (ICCABS) (01.06.2014)
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Conference Proceeding
In search of perfect reads
Pal, Soumitra, Aluru, Srinivas
Published in 2014 IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences (ICCABS) (01.06.2014)
Published in 2014 IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences (ICCABS) (01.06.2014)
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Conference Proceeding
Viral quasispecies assembly from paired-end reads
Topfer, Armin, Beerenwinkel, Niko
Published in 2014 IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences (ICCABS) (01.06.2014)
Published in 2014 IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences (ICCABS) (01.06.2014)
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Conference Proceeding
Role of ADAR in determining the substitution pattern in sigma virus (Rhabdoviridae) in Drosophila melanogaster
Piontkivska, Helen, Paul, Sinu, Scharfenberg, Brian, Wayne, Marta, Matos, Luis F., Farmerie, William G., Miyamoto, Michael M
Published in 2014 IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences (ICCABS) (01.06.2014)
Published in 2014 IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences (ICCABS) (01.06.2014)
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Conference Proceeding
Poster: Efficient record linkage techniques
Mamun, Abdullah-Al, Aseltine, Robert, Rajasekaran, Sanguthevar
Published in 2014 IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences (ICCABS) (01.06.2014)
Published in 2014 IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences (ICCABS) (01.06.2014)
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Conference Proceeding