Adlercreutzia hattorii sp. nov., an equol non-producing bacterium isolated from human faeces
Sakamoto, Mitsuo, Ikeyama, Nao, Yuki, Masahiro, Murakami, Takumi, Mori, Hiroshi, Iino, Takao, Ohkuma, Moriya
Published in International journal of systematic and evolutionary microbiology (01.12.2021)
Published in International journal of systematic and evolutionary microbiology (01.12.2021)
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Journal Article
Assessment of metagenomic workflows using a newly constructed human gut microbiome mock community
Mori, Hiroshi, Kato, Tamotsu, Ozawa, Hiroaki, Sakamoto, Mitsuo, Murakami, Takumi, Taylor, Todd D, Toyoda, Atsushi, Ohkuma, Moriya, Kurokawa, Ken, Ohno, Hiroshi
Published in DNA research (01.06.2023)
Published in DNA research (01.06.2023)
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Journal Article
Microbial interaction between the succinate‐utilizing bacterium Phascolarctobacterium faecium and the gut commensal Bacteroides thetaiotaomicron
Ikeyama, Nao, Murakami, Takumi, Toyoda, Atsushi, Mori, Hiroshi, Iino, Takao, Ohkuma, Moriya, Sakamoto, Mitsuo
Published in MicrobiologyOpen (Weinheim) (01.10.2020)
Published in MicrobiologyOpen (Weinheim) (01.10.2020)
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Journal Article
Ectosymbiotic bacterial microbiota densely colonize the surface of thelastomatid nematodes in the gut of the wood-feeding cockroach Panesthia angustipennis
Murakami, Takumi, Onouchi, Shu, Igai, Katsura, Ohkuma, Moriya, Hongoh, Yuichi
Published in FEMS microbiology ecology (01.02.2019)
Published in FEMS microbiology ecology (01.02.2019)
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Journal Article
Recognition of commensal bacterial peptidoglycans defines Drosophila gut homeostasis and lifespan
Onuma, Taro, Yamauchi, Toshitaka, Kosakamoto, Hina, Kadoguchi, Hibiki, Kuraishi, Takayuki, Murakami, Takumi, Mori, Hiroshi, Miura, Masayuki, Obata, Fumiaki
Published in PLoS genetics (06.04.2023)
Published in PLoS genetics (06.04.2023)
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Journal Article
Amedibacterium intestinale gen. nov., sp. nov., isolated from human faeces, and reclassification of Eubacterium dolichum Moore et al . 1976 (Approved Lists 1980) as Amedibacillus dolichus gen. nov., comb. nov
Ikeyama, Nao, Toyoda, Atsushi, Morohoshi, Sho, Kunihiro, Tadao, Murakami, Takumi, Mori, Hiroshi, Iino, Takao, Ohkuma, Moriya, Sakamoto, Mitsuo
Published in International journal of systematic and evolutionary microbiology (01.06.2020)
Published in International journal of systematic and evolutionary microbiology (01.06.2020)
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Journal Article
Metagenomic analyses highlight the symbiotic association between the glacier stonefly Andiperla willinki and its bacterial gut community
Murakami, Takumi, Segawa, Takahiro, Takeuchi, Nozomu, Barcaza Sepúlveda, Gonzalo, Labarca, Pedro, Kohshima, Shiro, Hongoh, Yuichi
Published in Environmental microbiology (01.11.2018)
Published in Environmental microbiology (01.11.2018)
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Journal Article
Comparative genomics of Parolsenella catena and Libanicoccus massiliensis: Reclassification of Libanicoccus massiliensis as Parolsenella massiliensis comb. nov
Sakamoto, Mitsuo, Ikeyama, Nao, Murakami, Takumi, Mori, Hiroshi, Yuki, Masahiro, Ohkuma, Moriya
Published in International journal of systematic and evolutionary microbiology (01.04.2019)
Published in International journal of systematic and evolutionary microbiology (01.04.2019)
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Journal Article
Dietary-protein sources modulate host susceptibility to Clostridioides difficile infection through the gut microbiota
Yakabe, Kyosuke, Higashi, Seiichiro, Akiyama, Masahiro, Mori, Hiroshi, Murakami, Takumi, Toyoda, Atsushi, Sugiyama, Yuta, Kishino, Shigenobu, Okano, Kenji, Hirayama, Akiyoshi, Gotoh, Aina, Li, Shunyi, Mori, Takeshi, Katayama, Takane, Ogawa, Jun, Fukuda, Shinji, Hase, Koji, Kim, Yun-Gi
Published in Cell reports (Cambridge) (13.09.2022)
Published in Cell reports (Cambridge) (13.09.2022)
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Journal Article
Metagenomics reveals global-scale contrasts in nitrogen cycling and cyanobacterial light-harvesting mechanisms in glacier cryoconite
Murakami, Takumi, Takeuchi, Nozomu, Mori, Hiroshi, Hirose, Yuu, Edwards, Arwyn, Irvine-Fynn, Tristram, Li, Zhongqin, Ishii, Satoshi, Segawa, Takahiro
Published in Microbiome (23.03.2022)
Published in Microbiome (23.03.2022)
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Journal Article
Local Necrotic Cells Trigger Systemic Immune Activation via Gut Microbiome Dysbiosis in Drosophila
Kosakamoto, Hina, Yamauchi, Toshitaka, Akuzawa-Tokita, Yoriko, Nishimura, Kei, Soga, Tomoyoshi, Murakami, Takumi, Mori, Hiroshi, Yamamoto, Kyosuke, Miyazaki, Ryo, Koto, Akiko, Miura, Masayuki, Obata, Fumiaki
Published in Cell reports (Cambridge) (21.07.2020)
Published in Cell reports (Cambridge) (21.07.2020)
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Journal Article
Genome analyses of uncultured TG2/ZB3 bacteria in 'Margulisbacteria' specifically attached to ectosymbiotic spirochetes of protists in the termite gut
Utami, Yuniar Devi, Kuwahara, Hirokazu, Igai, Katsura, Murakami, Takumi, Sugaya, Kaito, Morikawa, Takahiro, Nagura, Yuichi, Yuki, Masahiro, Deevong, Pinsurang, Inoue, Tetsushi, Kihara, Kumiko, Lo, Nathan, Yamada, Akinori, Ohkuma, Moriya, Hongoh, Yuichi
Published in The ISME Journal (01.02.2019)
Published in The ISME Journal (01.02.2019)
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Journal Article
Parallel reductive genome evolution in Desulfovibrio ectosymbionts independently acquired by Trichonympha protists in the termite gut
Takeuchi, Mariko, Kuwahara, Hirokazu, Murakami, Takumi, Takahashi, Kazuki, Kajitani, Rei, Toyoda, Atsushi, Itoh, Takehiko, Ohkuma, Moriya, Hongoh, Yuichi
Published in The ISME Journal (01.09.2020)
Published in The ISME Journal (01.09.2020)
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Journal Article