Population genomics of the pathogenic yeast Candida tropicalis identifies hybrid isolates in environmental samples
O'Brien, Caoimhe E, Oliveira-Pacheco, João, Ó Cinnéide, Eoin, Haase, Max A B, Hittinger, Chris Todd, Rogers, Thomas R, Zaragoza, Oscar, Bond, Ursula, Butler, Geraldine
Published in PLoS pathogens (31.03.2021)
Published in PLoS pathogens (31.03.2021)
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Journal Article
Draft Genome Sequence of the Birch Tree Fungal Pathogen Taphrina betulina UCD315
Heneghan, Padraic, Ryan, Adam P, Nimmo, Darragh, Duggan, Claudine, Kumar, Paurush, O'Gaora, Peadar, Ó 'Cinnéide, Eoin, Byrne, Kevin P, Wolfe, Kenneth H, O'Brien, Caoimhe E, Butler, Geraldine
Published in Microbiology resource announcements (27.11.2019)
Published in Microbiology resource announcements (27.11.2019)
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Journal Article
Evolution of the Genetic Code in the Ascoideales (CUG-Ser2) Yeast Clade: The Ancestral tRNA-Leu(CAG) Gene Is Retained in Most Saccharomycopsis Species but Is Nonessential and Not Used for Translation
Ó Cinnéide, Eoin, Scaife, Caitriona, Dillon, Eugène T, Wolfe, Kenneth H
Published in Genome biology and evolution (05.08.2024)
Published in Genome biology and evolution (05.08.2024)
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Journal Article
Alternative sulphur metabolism in the fungal pathogen Candida parapsilosis
Lombardi, Lisa, Salzberg, Letal I., Cinnéide, Eoin Ó, O’Brien, Caoimhe, Morio, Florent, Turner, Siobhán A., Byrne, Kevin P., Butler, Geraldine
Published in Nature communications (24.10.2024)
Published in Nature communications (24.10.2024)
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Journal Article
Identification of European isolates of the lager yeast parent Saccharomyces eubayanus
Bergin, Sean A, Allen, Stephen, Hession, Conor, Ó Cinnéide, Eoin, Ryan, Adam, Byrne, Kevin P, Ó Cróinín, Tadhg, Wolfe, Kenneth H, Butler, Geraldine
Published in FEMS yeast research (07.12.2022)
Published in FEMS yeast research (07.12.2022)
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Journal Article
Identification of a novel Candida metapsilosis isolate reveals multiple hybridization events
O'Brien, Caoimhe E, Zhai, Bing, Ola, Mihaela, Bergin, Sean A, Ó Cinnéide, Eoin, O'Connor, Ísla, Rolling, Thierry, Miranda, Edwin, Babady, N Esther, Hohl, Tobias M, Butler, Geraldine
Published in G3 : genes - genomes - genetics (01.01.2022)
Published in G3 : genes - genomes - genetics (01.01.2022)
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Journal Article
Evolution of the genetic code in the Ascoideales (CUG-Ser2) yeast clade: The ancestral tRNA-Leu(CAG) gene is retained in most Saccharomycopsis species but is non-essential and not used for translation
Cinnéide, Eoin Ó, Scaife, Caitriona, Dillon, Eugene, Wolfe, Kenneth H
Published in Genome biology and evolution (31.07.2024)
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Published in Genome biology and evolution (31.07.2024)
Journal Article
Genomic diversity, chromosomal rearrangements, and interspecies hybridization in the Ogataea polymorpha species complex
Hanson, Sara J, Cinnéide, Eoin Ó, Salzberg, Letal I, Wolfe, Kenneth H, McGowan, Jamie, Fitzpatrick, David A, Matlin, Kate
Published in G3 : genes - genomes - genetics (07.08.2021)
Published in G3 : genes - genomes - genetics (07.08.2021)
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Journal Article
WHO elements – A new category of selfish genetic elements at the borderline between homing elements and transposable elements
Osborne, Matthieu, Fubara, Athaliah, Ó Cinnéide, Eoin, Coughlan, Aisling Y., Wolfe, Kenneth H.
Published in Seminars in cell & developmental biology (01.11.2024)
Published in Seminars in cell & developmental biology (01.11.2024)
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Journal Article
Large-scale generation of mutant strains in Candida parapsilosis using CRISPR-Cas9
Lombardi, Lisa, Salzberg, Letal I., Cinnéide, Eoin Ó, O’Brien, Caoimhe, Butler, Geraldine
Published in Access microbiology (01.03.2019)
Published in Access microbiology (01.03.2019)
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Journal Article
Draft genome sequence of the yeast Schwanniomyces capriottii strain UCD805, isolated from soil in Ireland
Heneghan, Padraic G, Ryan, Adam P, Ó Cinnéide, Eoin, Davies, Jordan, Bracken, Cathal, Ogundipe, Victoria, Doheny, Maria, Lenihan, Liam, Passalaris, Anastasia, Walker, Rosalind, Wolfe, Kenneth H, Butler, Geraldine, Byrne, Kevin P
Published in Microbiology resource announcements (12.03.2024)
Published in Microbiology resource announcements (12.03.2024)
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Journal Article
Draft Genome Sequence of the Yeast Torulaspora quercuum Strain UCD657, Isolated from Soil in Ireland
Igharo, Blessing, Byrne, Kevin P., Ghnewa, Heytham, Davey, Ryan P., Fubara, Athaliah, Welc, Julia, Oubihi, Shafik, Moore, Luke, Smith, Cian, Ó Cinnéide, Eoin, Bergin, Sean A., Hession, Conor, Wolfe, Kenneth H., Butler, Geraldine
Published in Microbiology resource announcements (17.11.2022)
Published in Microbiology resource announcements (17.11.2022)
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Journal Article
Draft Genome Sequence of the Yeast Blastobotrys aristata Strain UCD613, Isolated from Soil in Ireland
Don, Aida, Byrne, Kevin P., Alqaderi, Fouz, Mazhova, Alexandra, O’Leary Chaney, Ben, Redmond, Sarah, Allen, Stephen, Gao, Jiaran, Ó Cinnéide, Eoin, Bergin, Sean A., Hession, Conor, Wolfe, Kenneth H., Butler, Geraldine
Published in Microbiology resource announcements (17.11.2022)
Published in Microbiology resource announcements (17.11.2022)
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Journal Article
Draft Genome Sequence of a Diploid and Hybrid Candida Strain, Candida sanyaensis UCD423, Isolated from Compost in Ireland
Ryan, Adam, Ó Cinnéide, Eoin, Bergin, Sean A, Alhajeri, Ghozlan, Almotawaa, Hawraa, Daly, Isabelle, Heneghan, Sophia, Horan, Kellie, Kavanagh, Roslyn, Keane, Christopher, Martin, Aaron, McDonagh, Ada, O’Leary, Julia, Osborne, Matthieu, Watson, Emma, Byrne, Kevin P, Wolfe, Kenneth H, Butler, Geraldine
Published in Microbiology resource announcements (23.09.2021)
Published in Microbiology resource announcements (23.09.2021)
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Journal Article
Draft Genome Sequence of the Yeast Ogataea degrootiae Strain UCD465, Isolated from Soil in Ireland
Ó Cinnéide, Eoin, Jones, Max, Bahate, Elijah, Boyd, Elizabeth, Clavero, Rebeca, Doherty, Harry, Drozdz, Izabela, Dumana, Maja, Gonzales, Cristina, Kennedy, Jane, Khan, Maria, Maher, Shane, McGurk, Clare, Moreau, Katherine, Neville, Ruby, Norton, Jade, Ó Cróinín, Tadhg, O’Gorman, Elizabeth, Olliff, Juliana C, Orimaco, Rhys, Quinn, Ellen, Webb Kennedy, Sarah, Bergin, Sean A, Byrne, Kevin P, Wolfe, Kenneth H, Butler, Geraldine
Published in Microbiology resource announcements (30.09.2021)
Published in Microbiology resource announcements (30.09.2021)
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Journal Article
Population genomics of the pathogenic yeast Candida tropicalis identifies hybrid isolates in environmental samples
Caoimhe E O’brien, Oliveira-Pacheco, João, Eoin Ó Cinnéide, Hasse, Max A B, Hittinger, Chris Todd, Rogers, Thomas R, Zaragoza, Oscar, Bond, Ursula, Butler, Geraldine
Published in bioRxiv (26.11.2020)
Published in bioRxiv (26.11.2020)
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