Same-Day Diagnostic and Surveillance Data for Tuberculosis via Whole-Genome Sequencing of Direct Respiratory Samples
Votintseva, Antonina A, Bradley, Phelim, Pankhurst, Louise, Del Ojo Elias, Carlos, Loose, Matthew, Nilgiriwala, Kayzad, Chatterjee, Anirvan, Smith, E Grace, Sanderson, Nicolas, Walker, Timothy M, Morgan, Marcus R, Wyllie, David H, Walker, A Sarah, Peto, Tim E A, Crook, Derrick W, Iqbal, Zamin
Published in Journal of Clinical Microbiology (01.05.2017)
Published in Journal of Clinical Microbiology (01.05.2017)
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Rapid antibiotic-resistance predictions from genome sequence data for Staphylococcus aureus and Mycobacterium tuberculosis
Bradley, Phelim, Gordon, N. Claire, Walker, Timothy M., Dunn, Laura, Heys, Simon, Huang, Bill, Earle, Sarah, Pankhurst, Louise J., Anson, Luke, de Cesare, Mariateresa, Piazza, Paolo, Votintseva, Antonina A., Golubchik, Tanya, Wilson, Daniel J., Wyllie, David H., Diel, Roland, Niemann, Stefan, Feuerriegel, Silke, Kohl, Thomas A., Ismail, Nazir, Omar, Shaheed V., Smith, E. Grace, Buck, David, McVean, Gil, Walker, A. Sarah, Peto, Tim E. A., Crook, Derrick W., Iqbal, Zamin
Published in Nature Communications (21.12.2015)
Published in Nature Communications (21.12.2015)
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Evolutionary dynamics of Staphylococcus aureus during progression from carriage to disease
Young, Bernadette C, Golubchik, Tanya, Batty, Elizabeth M, Fung, Rowena, Larner-Svensson, Hanna, Votintseva, Antonina A, Miller, Ruth R, Godwin, Heather, Knox, Kyle, Everitt, Richard G, Iqbal, Zamin, Rimmer, Andrew J, Cule, Madeleine, Ip, Camilla L. C, Didelot, Xavier, Harding, Rosalind M, Donnelly, Peter, Peto, Tim E, Crook, Derrick W, Bowden, Rory, Wilson, Daniel J
Published in Proceedings of the National Academy of Sciences - PNAS (20.03.2012)
Published in Proceedings of the National Academy of Sciences - PNAS (20.03.2012)
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Evolutionary Trade-Offs Underlie the Multi-faceted Virulence of Staphylococcus aureus
Laabei, Maisem, Uhlemann, Anne-Catrin, Lowy, Franklin D, Austin, Eloise D, Yokoyama, Maho, Ouadi, Khadija, Feil, Edward, Thorpe, Harry A, Williams, Barnabas, Perkins, Mark, Peacock, Sharon J, Clarke, Stephen R, Dordel, Janina, Holden, Matthew, Votintseva, Antonina A, Bowden, Rory, Crook, Derrick W, Young, Bernadette C, Wilson, Daniel J, Recker, Mario, Massey, Ruth C
Published in PLOS Biology (02.09.2015)
Published in PLOS Biology (02.09.2015)
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Mycobacterial DNA Extraction for Whole-Genome Sequencing from Early Positive Liquid (MGIT) Cultures
Votintseva, Antonina A, Pankhurst, Louise J, Anson, Luke W, Morgan, Marcus R, Gascoyne-Binzi, Deborah, Walker, Timothy M, Quan, T Phuong, Wyllie, David H, Del Ojo Elias, Carlos, Wilcox, Mark, Walker, A Sarah, Peto, Tim E A, Crook, Derrick W
Published in Journal of Clinical Microbiology (01.04.2015)
Published in Journal of Clinical Microbiology (01.04.2015)
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Evolutionary trade-offs underlie the multifaceted virulence of Staphylococcus aureus
Laabei, Maisem, Uhlemann, Anne-Catrin, Lowy, Franklin D, Austin, Eloise D, Yokoyama, Maho, Ouadi, Khadija, Feil, Edward, Thorpe, Harry A, Williams, Barnabas, Perkins, Mark, Peacock, Sharon J, Clarke, Stephen R, Dordel, Janina, Holden, Matthew, Votintseva, Antonina A, Bowden, Rory, Crook, Derrick W, Young, Bernadette C, Wilson, Daniel J, Recker, Mario, Massey, Ruth C
Published in PLoS Biology (01.09.2015)
Published in PLoS Biology (01.09.2015)
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Rapid, comprehensive, and affordable mycobacterial diagnosis with whole-genome sequencing: a prospective study
Pankhurst, Louise J, Dr, del Ojo Elias, Carlos, MSc, Votintseva, Antonina A, PhD, Walker, Timothy M, MRCP, Cole, Kevin, BSc, Davies, Jim, Prof, Fermont, Jilles M, MSc, Gascoyne-Binzi, Deborah M, PhD, Kohl, Thomas A, PhD, Kong, Clare, BSc, Lemaitre, Nadine, PhD, Niemann, Stefan, DSc ScD, Paul, John, MD, Rogers, Thomas R, FRCPath, Roycroft, Emma, MSc, Smith, E Grace, FRCPath, Supply, Philip, PhD, Tang, Patrick, PhD, Wilcox, Mark H, FRCPath, Wordsworth, Sarah, PhD, Wyllie, David, FRCPath, Xu, Li, PhD, Crook, Derrick W, FRCPath
Published in The lancet respiratory medicine (01.01.2016)
Published in The lancet respiratory medicine (01.01.2016)
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Prevalence of Staphylococcus aureus protein A (spa) mutants in the community and hospitals in Oxfordshire
Votintseva, Antonina A, Fung, Rowena, Miller, Ruth R, Knox, Kyle, Godwin, Heather, Wyllie, David H, Bowden, Rory, Crook, Derrick W, Walker, A Sarah
Published in BMC microbiology (12.03.2014)
Published in BMC microbiology (12.03.2014)
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Molecular Adaptation during a Rapid Adaptive Radiation
Kapralov, Maxim V, Votintseva, Antonina A, Filatov, Dmitry A
Published in Molecular biology and evolution (01.05.2013)
Published in Molecular biology and evolution (01.05.2013)
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Correction: Corrigendum: Rapid antibiotic-resistance predictions from genome sequence data for Staphylococcus aureus and Mycobacterium tuberculosis
Bradley, Phelim, Gordon, N. Claire, Walker, Timothy M., Dunn, Laura, Heys, Simon, Huang, Bill, Earle, Sarah, Pankhurst, Louise J., Anson, Luke, de Cesare, Mariateresa, Piazza, Paolo, Votintseva, Antonina A., Golubchik, Tanya, Wilson, Daniel J., Wyllie, David H., Diel, Roland, Niemann, Stefan, Feuerriegel, Silke, Kohl, Thomas A., Ismail, Nazir, Omar, Shaheed V., Smith, E. Grace, Buck, David, McVean, Gil, Walker, A. Sarah, Peto, Tim E. A., Crook, Derrick W., Iqbal, Zamin
Published in Nature communications (20.04.2016)
Published in Nature communications (20.04.2016)
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Journal Article
Corrigendum: Rapid antibiotic-resistance predictions from genome sequence data for Staphylococcus aureus and Mycobacterium tuberculosis
Bradley, Phelim, Gordon, N Claire, Walker, Timothy M, Dunn, Laura, Heys, Simon, Huang, Bill, Earle, Sarah, Pankhurst, Louise J, Anson, Luke, de Cesare, Mariateresa, Piazza, Paolo, Votintseva, Antonina A, Golubchik, Tanya, Wilson, Daniel J, Wyllie, David H, Diel, Roland, Niemann, Stefan, Feuerriegel, Silke, Kohl, Thomas A, Ismail, Nazir, Omar, Shaheed V, Smith, E Grace, Buck, David, McVean, Gil, Walker, A Sarah, Peto, Tim E A, Crook, Derrick W, Iqbal, Zamin
Published in Nature communications (20.04.2016)
Published in Nature communications (20.04.2016)
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Journal Article
Same-day diagnostic and surveillance data for tuberculosis via whole genome sequencing of direct respiratory samples
Votintseva, Antonina A., Bradley, Phelim, Pankhurst, Louise, Elias, Carlos del Ojo, Loose, Matthew, Nilgiriwala, Kayzad, Chatterjee, Anirvan, Smith, E. Grace, Sanderson, Nicolas, Walker, Timothy M., Morgan, Marcus R., Wyllie, David H., Walker, A. Sarah, Peto, Tim E.A., Crook, Derrick W., Iqbal, Zamin
Published in Journal of Clinical Microbiology (08.03.2017)
Published in Journal of Clinical Microbiology (08.03.2017)
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Journal Article
Evolutionary Trade-Offs Underlie the Multi-faceted Virulence of Staphylococcus aureus: e1002229
Laabei, Maisem, Uhlemann, Anne-Catrin, Lowy, Franklin D, Austin, Eloise D, Yokoyama, Maho, Ouadi, Khadija, Feil, Edward, Thorpe, Harry A, Williams, Barnabas, Perkins, Mark, Peacock, Sharon J, Clarke, Stephen R, Dordel, Janina, Holden, Matthew, Votintseva, Antonina A, Bowden, Rory, Crook, Derrick W, Young, Bernadette C, Wilson, Daniel J, Recker, Mario, Massey, Ruth C
Published in PLoS biology (01.09.2015)
Published in PLoS biology (01.09.2015)
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Journal Article
Rapid antibiotic-resistance predictions from genome sequence data for Staphylococcus aureus and Mycobacterium tuberculosis
Bradley, Phelim, Gordon, N Claire, Walker, Timothy M, Dunn, Laura, Heys, Simon, Huang, Bill, Earle, Sarah, Pankhurst, Louise J, Anson, Luke, de Cesare, Mariateresa, Piazza, Paolo, Votintseva, Antonina A, Golubchik, Tanya, Wilson, Daniel J, Wyllie, David H, Diel, Roland, Niemann, Stefan, Feuerriegel, Silke, Kohl, Thomas A, Ismail, Nazir, Omar, Shaheed V, Smith, E Grace, Buck, David, McVean, Gil, Walker, A Sarah, Peto, Tim EA, Crook, Derrick W, Iqbal, Zamin
Published in Nature communications (21.12.2015)
Published in Nature communications (21.12.2015)
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Journal Article
Evolutionary trade-offs underlie the multi-faceted virulence of Staphylococcus aureus
Laabei, Maisem, Uhlemann, Anne-Catrin, Lowy, Franklin D, Austin, Eloise D, Yokoyama, Maho, Ouadi, Khadija, Feil, Edward, Thorpe, Harry A, Williams, Barnabas, Perkins, Mark, Peacock, Sharon J, Clarke, Stephen R, Dordel, Janina, Holden, Matthew, Votintseva, Antonina A, Bowden, Rory, Crook, Derrick W, Young, Bernadette C, Wilson, Daniel J, Recker, Mario, Massey, Ruth C
Year of Publication 02.09.2015
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Year of Publication 02.09.2015
Journal Article
Same-day diagnostic and surveillance data for tuberculosis via whole genome sequencing of direct respiratory samples
Votintseva, Antonina A, Bradley, Phelim, Pankhurst, Louise, Carlos Del Ojo Elias, Loose, Matthew, Nilgiriwala, Kayzad, Chatterjee, Anirvan, Smith, E Grace, Sanderson, Nicholas, Walker, Timothy M, Morgan, Marcus R, Wyllie, David H, Walker, A Sarah, Peto, Tim Ea, Crook, Derrick W, Iqbal, Zamin
Published in bioRxiv (19.12.2016)
Published in bioRxiv (19.12.2016)
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Paper
Rapid antibiotic resistance predictions from genome sequence data for S. aureus and M. tuberculosis
Bradley, Phelim, Gordon, N Claire, Walker, Timothy M, Dunn, Laura, Heys, Simon, Huang, Bill, Earle, Sarah, Pankhurst, Louise J, Anson, Luke, De Cesare, Mariateresa, Piazza, Paolo, Votintseva, Antonina A, Golubchik, Tanya, Wilson, Daniel J, Wyllie, David H, Diel, Roland, Niemann, Stefan, Feuerriegel, Silke, Kohl, Thomas A, Ismail, Nazir, Omar, Shaheed V, Smith, E Grace, Buck, David, Mcvean, Gil, Walker, A Sarah, Peto, Tim, Crook, Derrick, Iqbal, Zamin
Published in bioRxiv (26.04.2015)
Published in bioRxiv (26.04.2015)
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