A RESTful API for accessing microbial community data for MG-RAST
Wilke, Andreas, Bischof, Jared, Harrison, Travis, Brettin, Tom, D'Souza, Mark, Gerlach, Wolfgang, Matthews, Hunter, Paczian, Tobias, Wilkening, Jared, Glass, Elizabeth M, Desai, Narayan, Meyer, Folker
Published in PLoS computational biology (01.01.2015)
Published in PLoS computational biology (01.01.2015)
Get full text
Journal Article
Whole-Genome-Based Phylogeny and Divergence of the Genus Brucella
Foster, Jeffrey T, Beckstrom-Sternberg, Stephen M, Pearson, Talima, Beckstrom-Sternberg, James S, Chain, Patrick S G, Roberto, Francisco F, Hnath, Jonathan, Brettin, Tom, Keim, Paul
Published in Journal of Bacteriology (01.04.2009)
Published in Journal of Bacteriology (01.04.2009)
Get full text
Journal Article
Genome of Methylobacillus flagellatus, Molecular Basis for Obligate Methylotrophy, and Polyphyletic Origin of Methylotrophy
CHISTOSERDOVA, Ludmila, LAPIDUS, Alla, LIDSTROM, Mary E, HAN, Cliff, GOODWIN, Lynne, SAUNDERS, Liz, BRETTIN, Tom, TAPIA, Roxanne, GILNA, Paul, LUCAS, Susan, RICHARDSON, Paul M
Published in Journal of Bacteriology (01.06.2007)
Published in Journal of Bacteriology (01.06.2007)
Get full text
Journal Article
Pandemic drugs at pandemic speed: infrastructure for accelerating COVID-19 drug discovery with hybrid machine learning- and physics-based simulations on high-performance computers
Bhati, Agastya P, Wan, Shunzhou, Alfè, Dario, Clyde, Austin R, Bode, Mathis, Tan, Li, Titov, Mikhail, Merzky, Andre, Turilli, Matteo, Jha, Shantenu, Highfield, Roger R, Rocchia, Walter, Scafuri, Nicola, Succi, Sauro, Kranzlmüller, Dieter, Mathias, Gerald, Wifling, David, Donon, Yann, Di Meglio, Alberto, Vallecorsa, Sofia, Ma, Heng, Trifan, Anda, Ramanathan, Arvind, Brettin, Tom, Partin, Alexander, Xia, Fangfang, Duan, Xiaotan, Stevens, Rick, Coveney, Peter V
Published in Interface focus (12.10.2021)
Published in Interface focus (12.10.2021)
Get full text
Journal Article
Genomics of an extreme psychrophile, Psychromonas ingrahamii
Riley, Monica, Staley, James T, Danchin, Antoine, Wang, Ting Zhang, Brettin, Thomas S, Hauser, Loren J, Land, Miriam L, Thompson, Linda S
Published in BMC genomics (06.05.2008)
Published in BMC genomics (06.05.2008)
Get full text
Journal Article
Complete Genome Sequence of the Thermophilic Bacterium Exiguobacterium sp. AT1b
VISHNIVETSKAYA, Tatiana A, LUCAS, Susan, SAUNDERS, E, BRETTIN, Tom, DETTER, Chris, HAN, Cliff, LARIMER, Frank, LAND, Miriam L, HAUSER, Loren J, KYRPIDES, Nikos C, OVCHINNIKOVA, Galina, KATHARIOU, Sophia, COPELAND, Alex, RAMALEY, Robert F, RODRIGUES, Debora F, HENDRIX, Christie, RICHARDSON, Paul, TIEDJE, James M, LAPIDUS, Alia, GLAVINA DEL RIO, Tijana, DALIN, E, TICE, Hope, BRUCE, David C, GOODWIN, Lynne A, PITLUCK, Sam
Published in Journal of Bacteriology (01.06.2011)
Published in Journal of Bacteriology (01.06.2011)
Get full text
Journal Article
Lateral gene transfer and ancient paralogy of operons containing redundant copies of tryptophan-pathway genes in Xylella species and in heterocystous cyanobacteria
Xie, Gary, Bonner, Carol A, Brettin, Tom, Gottardo, Raphael, Keyhani, Nemat O, Jensen, Roy A
Published in Genome biology (2003)
Published in Genome biology (2003)
Get full text
Journal Article
Complete genome sequence of Desulfomicrobium baculatum type strain (X)
Copeland, Alex, Spring, Stefan, Göker, Markus, Schneider, Susanne, Lapidus, Alla, Del Rio, Tijana Glavina, Tice, Hope, Cheng, Jan-Fang, Chen, Feng, Nolan, Matt, Bruce, David, Goodwin, Lynne, Pitluck, Sam, Ivanova, Natalia, Mavrommatis, Konstantinos, Ovchinnikova, Galina, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia C, Meincke, Linda, Sims, David, Brettin, Thomas, Detter, John C, Han, Cliff, Chain, Patrick, Bristow, Jim, Eisen, Jonathan A, Markowitz, Victor, Hugenholtz, Philip, Kyrpides, Nikos C, Klenk, Hans-Peter, Lucas, Susan
Published in Standards in genomic sciences (20.07.2009)
Published in Standards in genomic sciences (20.07.2009)
Get full text
Journal Article
Complete genome sequence of Eggerthella lenta type strain (IPP VPI 0255)
Saunders, Elizabeth, Pukall, Rüdiger, Abt, Birte, Lapidus, Alla, Glavina Del Rio, Tijana, Copeland, Alex, Tice, Hope, Cheng, Jan-Fang, Lucas, Susan, Chen, Feng, Nolan, Matt, Bruce, David, Goodwin, Lynne, Pitluck, Sam, Ivanova, Natalia, Mavromatis, Konstantinos, Ovchinnikova, Galina, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D, Chain, Patrick, Meincke, Linda, Sims, David, Brettin, Thomas, Detter, John C, Göker, Markus, Bristow, Jim, Eisen, Jonathan A, Markowitz, Victor, Hugenholtz, Philip, Kyrpides, Nikos C, Klenk, Hans-Peter, Han, Cliff
Published in Standards in genomic sciences (28.09.2009)
Published in Standards in genomic sciences (28.09.2009)
Get full text
Journal Article
Complete genome sequence of Desulfotomaculum acetoxidans type strain (5575)
Spring, Stefan, Lapidus, Alla, Schröder, Maren, Gleim, Dorothea, Sims, David, Meincke, Linda, Glavina Del Rio, Tijana, Tice, Hope, Copeland, Alex, Cheng, Jan-Fang, Lucas, Susan, Chen, Feng, Nolan, Matt, Bruce, David, Goodwin, Lynne, Pitluck, Sam, Ivanova, Natalia, Mavromatis, Konstantinos, Mikhailova, Natalia, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D, Chain, Patrick, Saunders, Elizabeth, Brettin, Thomas, Detter, John C, Göker, Markus, Bristow, Jim, Eisen, Jonathan A, Markowitz, Victor, Hugenholtz, Philip, Kyrpides, Nikos C, Klenk, Hans-Peter, Han, Cliff
Published in Standards in genomic sciences (22.11.2009)
Published in Standards in genomic sciences (22.11.2009)
Get full text
Journal Article
Complete genome sequence of Alicyclobacillus acidocaldarius type strain (104-IA)
Mavromatis, Konstantinos, Sikorski, Johannes, Lapidus, Alla, Glavina Del Rio, Tijana, Copeland, Alex, Tice, Hope, Cheng, Jan-Fang, Lucas, Susan, Chen, Feng, Nolan, Matt, Bruce, David, Goodwin, Lynne, Pitluck, Sam, Ivanova, Natalia, Ovchinnikova, Galina, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D, Chain, Patrick, Meincke, Linda, Sims, David, Chertkov, Olga, Han, Cliff, Brettin, Thomas, Detter, John C, Wahrenburg, Claudia, Rohde, Manfred, Pukall, Rüdiger, Göker, Markus, Bristow, Jim, Eisen, Jonathan A, Markowitz, Victor, Hugenholtz, Philip, Klenk, Hans-Peter, Kyrpides, Nikos C
Published in Standards in genomic sciences (28.01.2010)
Published in Standards in genomic sciences (28.01.2010)
Get full text
Journal Article
Complete genome sequence of Beutenbergia cavernae type strain (HKI 0122)
Land, Miriam, Pukall, Rüdiger, Abt, Birte, Göker, Markus, Rohde, Manfred, Glavina Del Rio, Tijana, Tice, Hope, Copeland, Alex, Cheng, Jan-Fang, Lucas, Susan, Chen, Feng, Nolan, Matt, Bruce, David, Goodwin, Lynne, Pitluck, Sam, Ivanova, Natalia, Mavromatis, Konstantinos, Ovchinnikova, Galina, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Hauser, Loren, Chang, Yun-Juan, Jefferies, Cynthia C, Saunders, Elizabeth, Brettin, Thomas, Detter, John C, Han, Cliff, Chain, Patrick, Bristow, James, Eisen, Jonathan A, Markowitz, Victor, Hugenholtz, Philip, Kyrpides, Nikos C, Klenk, Hans-Peter, Lapidus, Alla
Published in Standards in genomic sciences (20.07.2009)
Published in Standards in genomic sciences (20.07.2009)
Get full text
Journal Article