complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000
Buell, C. Robin, Joardar, Vinita, Lindeberg, Magdalen, Selengut, Jeremy, Paulsen, Ian T, Gwinn, Michelle L, Dodson, Robert J, Deboy, Robert T, Durkin, A. Scott, Kolonay, James F, Madupu, Ramana, Daugherty, Sean, Brinkac, Lauren, Beanan, Maureen J, Haft, Daniel H, Nelson, William C, Davidsen, Tanja, Zafar, Nikhat, Zhou, Liwei, Liu, Jia, Yuan, Qiaoping, Khouri, Hoda, Fedorova, Nadia, Tran, Bao, Russell, Daniel, Berry, Kristi, Utterback, Teresa, Van Aken, Susan E, Feldblyum, Tamara V, D'Ascenzo, Mark, Deng, Wen-Ling, Ramos, Adela R, Alfano, James R, Cartinhour, Samuel, Chatterjee, Arun K, Delaney, Terrence P, Lazarowitz, Sondra G, Martin, Gregory B, Schneider, David J, Tang, Xiaoyan, Bender, Carol L, White, Owen, Fraser, Claire M, Collmer, Alan
Published in Proceedings of the National Academy of Sciences - PNAS (02.09.2003)
Published in Proceedings of the National Academy of Sciences - PNAS (02.09.2003)
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Structural Flexibility in the Burkholderia mallei Genome
Nierman, William C., DeShazer, David, Kim, H. Stanley, Tettelin, Herve, Nelson, Karen E., Feldblyum, Tamara, Ulrich, Ricky L., Ronning, Catherine M., Brinkac, Lauren M., Daugherty, Sean C., Davidsen, Tanja D., Deboy, Robert T., Dimitrov, George, Dodson, Robert J., Durkin, A. Scott, Gwinn, Michelle L., Haft, Daniel H., Khouri, Hoda, Kolonay, James F., Madupu, Ramana, Mohammoud, Yasmin, Nelson, William C., Radune, Diana, Romero, Claudia M., Sarria, Saul, Selengut, Jeremy, Shamblin, Christine, Sullivan, Steven A., White, Owen, Yu, Yan, Zafar, Nikhat, Zhou, Liwei, Fraser, Claire M., Greenberg, E. Peter
Published in Proceedings of the National Academy of Sciences - PNAS (28.09.2004)
Published in Proceedings of the National Academy of Sciences - PNAS (28.09.2004)
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DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae
Smith, Hamilton O, Peterson, Jeremy D, Nelson, Karen E, Gill, Steven R, Mekalanos, John J, Fleishmann, Robert D, McDonald, Lisa, Hickey, Erin K, Nierman, William C, Bass, Steven, Dragoi, Ioana, White, Owen, Tettelin, Hervé, Fraser, Claire M, Umayam, Lowell, Richardson, Delwood, Read, Timothy D, Ermolaeva, Maria D, Colwell, Rita R, Sellers, Patrick, Clayton, Rebecca A, Eisen, Jonathan A, Utterback, Teresa, Dodson, Robert J, Salzberg, Steven L, Venter, J. Craig, Gwinn, Michelle L, Haft, Daniel H, Vamathevan, Jessica, Qin, Haiying, Nelson, William C, Heidelberg, John F
Published in Nature (London) (03.08.2000)
Published in Nature (London) (03.08.2000)
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Complete Genome Sequence of the Oral Pathogenic Bacterium Porphyromonas gingivalis Strain W83
Nelson, Karen E, Fleischmann, Robert D, DeBoy, Robert T, Paulsen, Ian T, Fouts, Derrick E, Eisen, Jonathan A, Daugherty, Sean C, Dodson, Robert J, Durkin, A Scott, Gwinn, Michelle, Haft, Daniel H, Kolonay, James F, Nelson, William C, Mason, Tanya, Tallon, Luke, Gray, Jessica, Granger, David, Tettelin, Hervé, Dong, Hong, Galvin, Jamie L, Duncan, Margaret J, Dewhirst, Floyd E, Fraser, Claire M
Published in Journal of Bacteriology (01.09.2003)
Published in Journal of Bacteriology (01.09.2003)
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Complete Genome Sequence of Neisseria meningitidis Serogroup B Strain MC58
Tettelin, Hervé, Saunders, Nigel J., Heidelberg, John, Jeffries, Alex C., Nelson, Karen E., Eisen, Jonathan A., Ketchum, Karen A., Hood, Derek W., Peden, John F., Dodson, Robert J., Nelson, William C., Gwinn, Michelle L., DeBoy, Robert, Peterson, Jeremy D., Hickey, Erin K., Haft, Daniel H., Salzberg, Steven L., White, Owen, Fleischmann, Robert D., Dougherty, Brian A., Mason, Tanya, Ciecko, Anne, Parksey, Debbie S., Blair, Eric, Cittone, Henry, Clark, Emily B., Cotton, Matthew D., Utterback, Terry R., Khouri, Hoda, Qin, Haiying, Vamathevan, Jessica, Gill, John, Scarlato, Vincenzo, Masignani, Vega, Pizza, Mariagrazia, Grandi, Guido, Sun, Li, Smith, Hamilton O., Fraser, Claire M., Moxon, E. Richard, Rappuoli, Rino, Venter, J. Craig
Published in Science (American Association for the Advancement of Science) (10.03.2000)
Published in Science (American Association for the Advancement of Science) (10.03.2000)
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Genomewide Identification of Pseudomonas syringae pv. tomato DC3000 Promoters Controlled by the HrpL Alternative Sigma Factor
Fouts, Derrick E., Abramovitch, Robert B., Alfano, James R., Baldo, Angela M., Buell, C. Robin, Cartinhour, Samuel, Chatterjee, Arun K., D'Ascenzo, Mark, Gwinn, Michelle L., Lazarowitz, Sondra G., Lin, Nai-Chun, Martin, Gregory B., Rehm, Amos H., Schneider, David J., van Dijk, Karin, Tang, Xiaoyan, Collmer, Alan
Published in Proceedings of the National Academy of Sciences - PNAS (19.02.2002)
Published in Proceedings of the National Academy of Sciences - PNAS (19.02.2002)
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bacterial genome in flux: the twelve linear and nine circular extrachromosomal DNAs in an infectious isolate of the Lyme disease spirochete Borrelia burgdorferi
Casjens, S, Palmer, N, Van Vugt, R, Huang, W.M, Stevenson, B, Rosa, P, Lathigra, R, Sutton, G, Peterson, J, Dodson, R.J
Published in Molecular microbiology (01.02.2000)
Published in Molecular microbiology (01.02.2000)
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Evidence for lateral gene transfer between Archaea and Bacteria from genome sequence of Thermotoga maritima
Fraser, Claire M, Nelson, Karen E, Clayton, Rebecca A, Gill, Steven R, Gwinn, Michelle L, Dodson, Robert J, Haft, Daniel H, Hickey, Erin K, Peterson, Jeremy D, Nelson, William C, Ketchum, Karen A, McDonald, Lisa, Utterback, Teresa R, Malek, Joel A, Linher, Katja D, Garrett, Mina M, Stewart, Ashley M, Cotton, Matthew D, Pratt, Matthew S, Phillips, Cheryl A, Richardson, Delwood, Heidelberg, John, Sutton, Granger G, Fleischmann, Robert D, Eisen, Jonathan A, White, Owen, Salzberg, Steven L, Smith, Hamilton O, Venter, J. Craig
Published in Nature (London) (27.05.1999)
Published in Nature (London) (27.05.1999)
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Genome Sequence of the Radioresistant Bacterium Deinococcus radiodurans R1
White, Owen, Eisen, Jonathan A., Heidelberg, John F., Hickey, Erin K., Peterson, Jeremy D., Dodson, Robert J., Haft, Daniel H., Gwinn, Michelle L., Nelson, William C., Richardson, Delwood L., Moffat, Kelly S., Qin, Haiying, Jiang, Lingxia, Pamphile, Wanda, Crosby, Marie, Shen, Mian, Vamathevan, Jessica J., Lam, Peter, McDonald, Lisa, Utterback, Terry, Zalewski, Celeste, Makarova, Kira S., Aravind, L., Daly, Michael J., Minton, Kenneth W., Fleischmann, Robert D., Ketchum, Karen A., Nelson, Karen E., Salzberg, Steven, Smith, Hamilton O., Venter, J. Craig, Fraser, Claire M.
Published in Science (American Association for the Advancement of Science) (19.11.1999)
Published in Science (American Association for the Advancement of Science) (19.11.1999)
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The Complete Genome Sequence of Chlorobium tepidum TLS, A Photosynthetic, Anaerobic, Green-Sulfur Bacterium
Eisen, Jonathan A., Nelson, Karen E., Paulsen, Ian T., Heidelberg, John F., Wu, Martin, Dodson, Robert J., Deboy, Robert, Gwinn, Michelle L., Nelson, William C., Haft, Daniel H., Hickey, Erin K., Peterson, Jeremy D., Durkin, A. Scott, Kolonay, James L., Yang, Fan, Holt, Ingeborg, Umayam, Lowell A., Mason, Tanya, Brenner, Michael, Shea, Terrance P., Parksey, Debbie, Nierman, William C., Feldblyum, Tamara V., Hansen, Cheryl L., Craven, M. Brook, Radune, Diana, Vamathevan, Jessica, Khouri, Hoda, White, Owen, Gruber, Tanja M., Ketchum, Karen A., Venter, J. Craig, Tettelin, Hervé, Bryant, Donald A., Fraser, Claire M.
Published in Proceedings of the National Academy of Sciences - PNAS (09.07.2002)
Published in Proceedings of the National Academy of Sciences - PNAS (09.07.2002)
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DNA uptake signal sequences in naturally transformable bacteria
Smith, Hamilton O, Gwinn, Michelle L, Salzberg, Steven L
Published in Research in microbiology (01.11.1999)
Published in Research in microbiology (01.11.1999)
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Genome Analysis of Multiple Pathogenic Isolates of Streptococcus agalactiae: Implications for the Microbial "Pan-Genome"
Tettelin, Hervé, Masignani, Vega, Cieslewicz, Michael J., Donati, Claudio, Medini, Duccio, Ward, Naomi L., Angiuoli, Samuel V., Crabtree, Jonathan, Jones, Amanda L., Durkin, A. Scott, DeBoy, Robert T., Davidsen, Tanja M., Mora, Marirosa, Scarselli, Maria, Immaculada Margarit y Ros, Peterson, Jeremy D., Hauser, Christopher R., Sundaram, Jaideep P., Nelson, William C., Madupu, Ramana, Brinkac, Lauren M., Dodson, Robert J., Rosovitz, Mary J., Sullivan, Steven A., Daugherty, Sean C., Haft, Daniel H., Selengut, Jeremy, Gwinn, Michelle L., Zhou, Liwei, Zafar, Nikhat, Khouri, Hoda, Radune, Diana, Dimitrov, George, Watkins, Kisha, Kevin J. B. O'Connor, Smith, Shannon, Utterback, Teresa R., White, Owen, Rubens, Craig E., Grandi, Guido, Madoff, Lawrence C., Kasper, Dennis L., Telford, John L., Wessels, Michael R., Rappuoli, Rino, Fraser, Claire M.
Published in Proceedings of the National Academy of Sciences - PNAS (27.09.2005)
Published in Proceedings of the National Academy of Sciences - PNAS (27.09.2005)
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Complete genome sequence of the plant commensal Pseudomonas fluorescens Pf-5
Paulsen, I.T, Press, C.M, Ravel, J, Kobayashi, D.Y, Myers, G.S.A, Mavrodi, D.V, DeBoy, R.T, Seshadri, R, Ren, Q, Madupu, R
Published in Nature biotechnology (01.07.2005)
Published in Nature biotechnology (01.07.2005)
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The genome sequence of Bacillus anthracis Ames and comparison to closely related bacteria
Read, Timothy D, Peterson, Scott N, Tourasse, Nicolas, Baillie, Les W, Paulsen, Ian T, Nelson, Karen E, Tettelin, Hervé, Fouts, Derrick E, Eisen, Jonathan A, Gill, Steven R, Holtzapple, Erik K, Økstad, Ole Andreas, Helgason, Erlendur, Rilstone, Jennifer, Wu, Martin, Kolonay, James F, Beanan, Maureen J, Dodson, Robert J, Brinkac, Lauren M, Gwinn, Michelle, DeBoy, Robert T, Madpu, Ramana, Daugherty, Sean C, Durkin, A. Scott, Haft, Daniel H, Nelson, William C, Peterson, Jeremy D, Pop, Mihai, Khouri, Hoda M, Radune, Diana, Benton, Jonathan L, Mahamoud, Yasmin, Jiang, Lingxia, Hance, Ioana R, Weidman, Janice F, Berry, Kristi J, Plaut, Roger D, Wolf, Alex M, Watkins, Kisha L, Nierman, William C, Hazen, Alyson, Cline, Robin, Redmond, Caroline, Thwaite, Joanne E, White, Owen, Salzberg, Steven L, Thomason, Brendan, Friedlander, Arthur M, Koehler, Theresa M, Hanna, Philip C, Kolstø, Anne-Brit, Fraser, Claire M
Published in Nature (London) (01.05.2003)
Published in Nature (London) (01.05.2003)
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Whole-Genome Sequence Analysis of Pseudomonas syringae pv. phaseolicola 1448A Reveals Divergence among Pathovars in Genes Involved in Virulence and Transposition
JOARDAR, Vinita, LINDEBERG, Magdalen, MADUPU, Ramana, NELSON, William C, ROSOVITZ, M. J, SULLIVAN, Steven, CRABTREE, Jonathan, CREASY, Todd, DAVIDSEN, Tanja, HAFT, Dan H, ZAFAR, Nikhat, LIWEI ZHOU, JACKSON, Robert W, HALPIN, Rebecca, HOLLEY, Tara, KHOURI, Hoda, FELDBLYUM, Tamara, WHITE, Owen, FRASER, Claire M, CHATTERJEE, Arun K, CARTINHOUR, Sam, SCHNEIDER, David J, MANSFIELD, John, SELENGUT, Jeremy, COLLMER, Alan, BUELL, C. Robin, DODSON, Robert, BRINKAC, Lauren M, DAUGHERTY, Sean C, DEBOY, Robert, DURKIN, A. Scott, GIGLIO, Michelle Gwinn
Published in Journal of Bacteriology (01.09.2005)
Published in Journal of Bacteriology (01.09.2005)
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Complete Genome Sequence of Caulobacter crescentus
Nierman, William C., Feldblyum, Tamara V., Laub, Michael T., Paulsen, Ian T., Nelson, Karen E., Eisen, Jonathan, Heidelberg, John F., Alley, M. R. K., Ohta, Noriko, Maddock, Janine R., Potocka, Isabel, Nelson, William C., Newton, Austin, Stephens, Craig, Phadke, Nikhil D., Ely, Bert, DeBoy, Robert T., Dodson, Robert J., Durkin, A. Scott, Gwinn, Michelle L., Haft, Daniel H., Kolonay, James F., Smit, John, Craven, M. B., Khouri, Hoda, Shetty, Jyoti, Berry, Kristi, Utterback, Teresa, Tran, Kevin, Wolf, Alex, Vamathevan, Jessica, Ermolaeva, Maria, White, Owen, Salzberg, Steven L., Venter, J. Craig, Shapiro, Lucy, Fraser, Claire M.
Published in Proceedings of the National Academy of Sciences - PNAS (27.03.2001)
Published in Proceedings of the National Academy of Sciences - PNAS (27.03.2001)
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Genomic sequence of a Lyme disease spirochaete, Borrelia burgdorferi
Fraser, Claire M, Casjens, Sherwood, Huang, Wai Mun, Sutton, Granger G, Clayton, Rebecca, Lathigra, Raju, White, Owen, Ketchum, Karen A, Dodson, Robert, Hickey, Erin K, Gwinn, Michelle, Dougherty, Brian, Tomb, Jean-Francois, Fleischmann, Robert D, Richardson, Delwood, Peterson, Jeremy, Kerlavage, Anthony R, Quackenbush, John, Salzberg, Steven, Hanson, Mark, van Vugt, Rene, Palmer, Nanette, Adams, Mark D, Gocayne, Jeannine, Weidman, Janice, Utterback, Teresa, Watthey, Larry, McDonald, Lisa, Artiach, Patricia, Bowman, Cheryl, Garland, Stacey, Fujii, Claire, Cotton, Matthew D, Horst, Kurt, Roberts, Kevin, Hatch, Bonnie, Smith, Hamilton O, Venter, J. Craig
Published in Nature (London) (11.12.1997)
Published in Nature (London) (11.12.1997)
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Complete Genome Sequence of Treponema pallidum, the Syphilis Spirochete
Fraser, Claire M., Norris, Steven J., Weinstock, George M., White, Owen, Sutton, Granger G., Dodson, Robert, Gwinn, Michelle, Hickey, Erin K., Clayton, Rebecca, Ketchum, Karen A., Sodergren, Erica, Hardham, John M., McLeod, Michael P., Salzberg, Steven, Peterson, Jeremy, Khalak, Hanif, Richardson, Delwood, Howell, Jerrilyn K., Chidambaram, Monjula, Utterback, Teresa, McDonald, Lisa, Artiach, Patricia, Bowman, Cheryl, Cotton, Matthew D., Fujii, Claire, Garland, Stacey, Hatch, Bonnie, Horst, Kurt, Roberts, Kevin, Sandusky, Mina, Weidman, Janice, Smith, Hamilton O., Venter, J. Craig
Published in Science (American Association for the Advancement of Science) (17.07.1998)
Published in Science (American Association for the Advancement of Science) (17.07.1998)
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Genome sequence of Enterobacter radicincitans DSM16656(T), a plant growth-promoting endophyte
Witzel, Katja, Gwinn-Giglio, Michelle, Nadendla, Suvarna, Shefchek, Kent, Ruppel, Silke
Published in Journal of bacteriology (01.10.2012)
Published in Journal of bacteriology (01.10.2012)
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Three Genomes from the Phylum Acidobacteria Provide Insight into the Lifestyles of These Microorganisms in Soils
Ward, Naomi L, Challacombe, Jean F, Janssen, Peter H, Henrissat, Bernard, Coutinho, Pedro M, Wu, Martin, Xie, Gary, Haft, Daniel H, Sait, Michelle, Badger, Jonathan, Barabote, Ravi D, Bradley, Brent, Brettin, Thomas S, Brinkac, Lauren M, Bruce, David, Creasy, Todd, Daugherty, Sean C, Davidsen, Tanja M, DeBoy, Robert T, Detter, J. Chris, Dodson, Robert J, Durkin, A. Scott, Ganapathy, Anuradha, Gwinn-Giglio, Michelle, Han, Cliff S, Khouri, Hoda, Kiss, Hajnalka, Kothari, Sagar P, Madupu, Ramana, Nelson, Karen E, Nelson, William C, Paulsen, Ian, Penn, Kevin, Ren, Qinghu, Rosovitz, M.J, Selengut, Jeremy D, Shrivastava, Susmita, Sullivan, Steven A, Tapia, Roxanne, Thompson, L. Sue, Watkins, Kisha L, Yang, Qi, Yu, Chunhui, Zafar, Nikhat, Zhou, Liwei, Kuske, Cheryl R
Published in Applied and Environmental Microbiology (01.04.2009)
Published in Applied and Environmental Microbiology (01.04.2009)
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