Characterization of the core rumen microbiome in cattle during transition from forage to concentrate as well as during and after an acidotic challenge
Petri, Renee M, Schwaiger, Tyler, Penner, Greg B, Beauchemin, Karen A, Forster, Robert J, McKinnon, John J, McAllister, Tim A
Published in PloS one (31.12.2013)
Published in PloS one (31.12.2013)
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Journal Article
Pathogens of Bovine Respiratory Disease in North American Feedlots Conferring Multidrug Resistance via Integrative Conjugative Elements
Klima, Cassidy L, Zaheer, Rahat, Cook, Shaun R, Booker, Calvin W, Hendrick, Steve, Alexander, Trevor W, McAllister, Tim A
Published in Journal of Clinical Microbiology (01.02.2014)
Published in Journal of Clinical Microbiology (01.02.2014)
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Journal Article
Influence of Season and Feedlot Location on Prevalence and Virulence Factors of Seven Serogroups of Escherichia coli in Feces of Western-Canadian Slaughter Cattle
Stanford, Kim, Johnson, Roger P, Alexander, Trevor W, McAllister, Tim A, Reuter, Tim
Published in PloS one (02.08.2016)
Published in PloS one (02.08.2016)
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Journal Article
A review of the resistome within the digestive tract of livestock
Ma, Tao, McAllister, Tim A, Guan, Le Luo
Published in Journal of animal science and biotechnology (11.11.2021)
Published in Journal of animal science and biotechnology (11.11.2021)
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Journal Article
Assessment of different enrichment methods revealed the optimal approach to identify bovine circRnas
Wang, Yixin, Wang, Jian, Gruninger, Robert J, McAllister, Tim A, Li, Mingzhou, Guan, Le Luo
Published in RNA biology (31.12.2024)
Published in RNA biology (31.12.2024)
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Journal Article
Comparative genomics of Enterococcus spp. isolated from bovine feces
Beukers, Alicia G, Zaheer, Rahat, Goji, Noriko, Amoako, Kingsley K, Chaves, Alexandre V, Ward, Michael P, McAllister, Tim A
Published in BMC microbiology (08.03.2017)
Published in BMC microbiology (08.03.2017)
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Journal Article
Repeated inoculation of cattle rumen with bison rumen contents alters the rumen microbiome and improves nitrogen digestibility in cattle
Ribeiro, Gabriel O., Oss, Daniela B., He, Zhixiong, Gruninger, Robert J., Elekwachi, Chijioke, Forster, Robert J., Yang, WenZhu, Beauchemin, Karen A., McAllister, Tim A.
Published in Scientific reports (28.04.2017)
Published in Scientific reports (28.04.2017)
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Journal Article
Snapshot of the eukaryotic gene expression in muskoxen rumen--a metatranscriptomic approach
Qi, Meng, Wang, Pan, O'Toole, Nicholas, Barboza, Perry S, Ungerfeld, Emilio, Leigh, Mary Beth, Selinger, L Brent, Butler, Greg, Tsang, Adrian, McAllister, Tim A, Forster, Robert J
Published in PloS one (31.05.2011)
Published in PloS one (31.05.2011)
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Journal Article
Greenhouse gas and ammonia emissions from stored manure from beef cattle supplemented 3-nitrooxypropanol and monensin to reduce enteric methane emissions
Owens, Jennifer L., Thomas, Ben W., Stoeckli, Jessica L., Beauchemin, Karen A., McAllister, Tim A., Larney, Francis J., Hao, Xiying
Published in Scientific reports (09.11.2020)
Published in Scientific reports (09.11.2020)
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Journal Article
Biodegradation of bovine spongiform encephalopathy prions in compost
Xu, Shanwei, Abeysekara, Sujeema, Dudas, Sandor, Czub, Stefanie, Staskevicius, Antanas, Mitchell, Gordon, Amoako, Kingsley K., McAllister, Tim A.
Published in Scientific reports (23.12.2022)
Published in Scientific reports (23.12.2022)
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Journal Article
Resistome diversity in cattle and the environment decreases during beef production
Noyes, Noelle R, Yang, Xiang, Linke, Lyndsey M, Magnuson, Roberta J, Dettenwanger, Adam, Cook, Shaun, Geornaras, Ifigenia, Woerner, Dale E, Gow, Sheryl P, McAllister, Tim A, Yang, Hua, Ruiz, Jaime, Jones, Kenneth L, Boucher, Christina A, Morley, Paul S, Belk, Keith E
Published in eLife (08.03.2016)
Published in eLife (08.03.2016)
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Journal Article
Comparative Genomic Analysis of Mannheimia haemolytica from Bovine Sources
Klima, Cassidy L, Cook, Shaun R, Zaheer, Rahat, Laing, Chad, Gannon, Vick P, Xu, Yong, Rasmussen, Jay, Potter, Andrew, Hendrick, Steve, Alexander, Trevor W, McAllister, Tim A
Published in PloS one (29.02.2016)
Published in PloS one (29.02.2016)
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Journal Article
Comparative Transcriptomic Analysis of Rectal Tissue from Beef Steers Revealed Reduced Host Immunity in Escherichia coli O157:H7 Super-Shedders
Wang, Ou, Liang, Guanxiang, McAllister, Tim A, Plastow, Graham, Stanford, Kim, Selinger, Brent, Guan, Le Luo
Published in PloS one (09.03.2016)
Published in PloS one (09.03.2016)
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Journal Article
Changes in bacterial community composition of Escherichia coli O157:H7 super-shedder cattle occur in the lower intestine
Zaheer, Rahat, Dugat-Bony, Eric, Holman, Devon, Cousteix, Elodie, Xu, Yong, Munns, Krysty, Selinger, Lorna J, Barbieri, Rutn, Alexander, Trevor, McAllister, Tim A, Selinger, L Brent
Published in PloS one (31.01.2017)
Published in PloS one (31.01.2017)
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Journal Article
Escherichia coli O157:H7 super-shedder and non-shedder feedlot steers harbour distinct fecal bacterial communities
Xu, Yong, Dugat-Bony, Eric, Zaheer, Rahat, Selinger, Lorna, Barbieri, Ruth, Munns, Krysty, McAllister, Tim A, Selinger, L Brent
Published in PloS one (23.05.2014)
Published in PloS one (23.05.2014)
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Journal Article
Host mechanisms involved in cattle Escherichia coli O157 shedding: a fundamental understanding for reducing foodborne pathogen in food animal production
Wang, Ou, McAllister, Tim A., Plastow, Graham, Stanford, Kim, Selinger, Brent, Guan, Le Luo
Published in Scientific reports (09.08.2017)
Published in Scientific reports (09.08.2017)
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Journal Article