Tools for fundamental analysis functions of TCR repertoires: a systematic comparison
Zhang, Yanfang, Yang, Xiujia, Zhang, Yanxia, Zhang, Yan, Wang, Minhui, Ou, Jin Xia, Zhu, Yan, Zeng, Huikun, Wu, Jiaqi, Lan, Chunhong, Zhou, Hong-Wei, Yang, Wei, Zhang, Zhenhai
Published in Briefings in bioinformatics (25.09.2020)
Published in Briefings in bioinformatics (25.09.2020)
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Novel Allele Detection Tool Benchmark and Application With Antibody Repertoire Sequencing Dataset
Yang, Xiujia, Zhu, Yan, Chen, Sen, Zeng, Huikun, Guan, Junjie, Wang, Qilong, Lan, Chunhong, Sun, Deqiang, Yu, Xueqing, Zhang, Zhenhai
Published in Frontiers in immunology (26.10.2021)
Published in Frontiers in immunology (26.10.2021)
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Dual UMIs and Dual Barcodes With Minimal PCR Amplification Removes Artifacts and Acquires Accurate Antibody Repertoire
Wang, Qilong, Zeng, Huikun, Zhu, Yan, Wang, Minhui, Zhang, Yanfang, Yang, Xiujia, Tang, Haipei, Li, Hongliang, Chen, Yuan, Ma, Cuiyu, Lan, Chunhong, Liu, Bin, Yang, Wei, Yu, Xueqing, Zhang, Zhenhai
Published in Frontiers in immunology (22.12.2021)
Published in Frontiers in immunology (22.12.2021)
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RAPID: A Rep-Seq Dataset Analysis Platform With an Integrated Antibody Database
Zhang, Yanfang, Chen, Tianjian, Zeng, Huikun, Yang, Xiujia, Xu, Qingxian, Zhang, Yanxia, Chen, Yuan, Wang, Minhui, Zhu, Yan, Lan, Chunhong, Wang, Qilong, Tang, Haipei, Zhang, Yan, Wang, Chengrui, Xie, Wenxi, Ma, Cuiyu, Guan, Junjie, Guo, Shixin, Chen, Sen, Yang, Wei, Wei, Lai, Ren, Jian, Yu, Xueqing, Zhang, Zhenhai
Published in Frontiers in immunology (13.08.2021)
Published in Frontiers in immunology (13.08.2021)
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The Biological Significance of Multi-copy Regions and Their Impact on Variant Discovery
Sun, Jing, Zhang, Yanfang, Wang, Minhui, Guan, Qian, Yang, Xiujia, Ou, Jin Xia, Yan, Mingchen, Wang, Chengrui, Zhang, Yan, Li, Zhi-Hao, Lan, Chunhong, Mao, Chen, Zhou, Hong-Wei, Hao, Bingtao, Zhang, Zhenhai
Published in Genomics, proteomics & bioinformatics (01.10.2020)
Published in Genomics, proteomics & bioinformatics (01.10.2020)
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A Deep Learning Model for Accurate Diagnosis of Infection Using Antibody Repertoires
Chen, Yuan, Ye, Zhiming, Zhang, Yanfang, Xie, Wenxi, Chen, Qingyun, Lan, Chunhong, Yang, Xiujia, Zeng, Huikun, Zhu, Yan, Ma, Cuiyu, Tang, Haipei, Wang, Qilong, Guan, Junjie, Chen, Sen, Li, Fenxiang, Yang, Wei, Yan, Huacheng, Yu, Xueqing, Zhang, Zhenhai
Published in The Journal of immunology (1950) (15.06.2022)
Published in The Journal of immunology (1950) (15.06.2022)
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Large-scale analysis of 2,152 Ig-seq datasets reveals key features of B cell biology and the antibody repertoire
Yang, Xiujia, Wang, Minhui, Wu, Jiaqi, Shi, Dianchun, Zhang, Yanfang, Zeng, Huikun, Zhu, Yan, Lan, Chunhong, Deng, Yang, Guo, Shixin, Xu, Lijun, Ma, Cuiyu, Zhang, Yanxia, Ou, Jinxia, Liu, Chu-jun, Chen, Yuan, Wang, Qilong, Xie, Wenxi, Guan, Junjie, Ding, Jieyu, Wang, Zhi, Chang, Changqing, Yang, Wei, Zhang, Huijie, Chen, Jun, Qin, Lijie, Zhou, Hongwei, Bei, Jin-Xin, Wei, Lai, Cao, Guangwen, Yu, Xueqing, Zhang, Zhenhai
Published in Cell reports (Cambridge) (11.05.2021)
Published in Cell reports (Cambridge) (11.05.2021)
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Antibody upstream sequence diversity and its biological implications revealed by repertoire sequencing
Zhu, Yan, Yang, Xiujia, Ma, Cuiyu, Tang, Haipei, Wang, Qilong, Guan, Junjie, Xie, Wenxi, Chen, Sen, Chen, Yuan, Wang, Minhui, Lan, Chunhong, Sun, Deqiang, Wei, Lai, Sun, Caijun, Yu, Xueqing, Zhang, Zhenhai
Published in Journal of genetics and genomics (20.10.2021)
Published in Journal of genetics and genomics (20.10.2021)
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