TCR Convergence in Individuals Treated With Immune Checkpoint Inhibition for Cancer
Looney, Timothy John, Topacio-Hall, Denise, Lowman, Geoffrey, Conroy, Jeffrey, Morrison, Carl, Oh, David, Fong, Lawrence, Zhang, Li
Published in Frontiers in immunology (09.01.2020)
Published in Frontiers in immunology (09.01.2020)
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Journal Article
Abstract 511: Clonal lineage and somatic hypermutation analysis comparing DNA and RNA as input material by long amplicon IGH chain sequencing
Toro, Michelle, Lowman, Geoffrey, Pickle, Loni, Ostresh, Stephanie, Andersen, Mark, Sarda, Shrutii, Yang, Chenchen
Published in Cancer research (Chicago, Ill.) (01.07.2021)
Published in Cancer research (Chicago, Ill.) (01.07.2021)
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Journal Article
Characterization of the Immunoglobulin Heavy- and Light-Chain Repertoires in a Single Reaction
Lowman, Geoffrey, Toro, Michelle, Chang, Jayde, Pickle, Loni, Yang, Chenchen, Looney, Timothy
Published in Blood (05.11.2020)
Published in Blood (05.11.2020)
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Journal Article
Abstract 3305: Comparative analysis of RNA versus DNA as input material for IGH repertoire sequencing based detection of rare clonal B cells at a frequency of 10E-6
Toro, Michelle, Pickle, Loni, Chang, Jayde, Looney, Timothy, Lowman, Geoffrey, Andersen, Mark, Hyland, Fiona
Published in Cancer research (Chicago, Ill.) (15.08.2020)
Published in Cancer research (Chicago, Ill.) (15.08.2020)
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Journal Article
Detection of Low Frequency T-Cell Clones Via a Next Generation Sequencing (NGS) Based Immune-Oncology Research Assay
Williamson, John, Looney, Timothy, Lowman, Geoffrey, Sidhu, Harwinder, Solano, Luis, Salazar, Suzanne, Tian, Huan, Ramsamooj, Rajendra
Published in Blood (13.11.2019)
Published in Blood (13.11.2019)
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Journal Article
Long-Amplicon Sequencing of Rearranged IGH Chains Enables Simultaneous Measurement of Somatic Hypermutation and Isotype in Chronic Lymphocytic Leukemia
Looney, Timothy, Lowman, Geoffrey, Pickle, Loni, Chang, Jayde, Topacio-Hall, Denise, Toro, Michelle, Hyland, Fiona
Published in Blood (13.11.2019)
Published in Blood (13.11.2019)
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Journal Article
Abstract 6472: Clonal lineage and somatic hypermutation analysis of chronic lymphocytic leukemia by long-amplicon IGH chain sequencing
Chang, Jayde, Davis, Zadie, Quest, Graeme, Feilloter, Harriet, Toro, Michelle, Lowman, Geoffrey, Pickle, Loni, Hyland, Fiona, Looney, Timothy
Published in Cancer research (Chicago, Ill.) (15.08.2020)
Published in Cancer research (Chicago, Ill.) (15.08.2020)
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Journal Article
Peripheral blood TCRB chain convergence and clonal expansion following cytomegalovirus infection: Implications for the biomarker use of TCR-seq
Looney, Timothy, Zheng, Jianping, Topacio-Hall, Denise, Lowman, Geoffrey, Hyland, Fiona
Published in Journal of clinical oncology (10.03.2019)
Published in Journal of clinical oncology (10.03.2019)
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Journal Article
Evaluating the link between T cell receptor beta variable gene polymorphism and immune mediated adverse events during checkpoint blockade immunotherapy
Looney, Timothy, Linch, Elizabeth, Lowman, Geoffrey, Miller, Lauren, Zheng, Jianping, Topacio-Hall, Denise
Published in Journal of clinical oncology (20.05.2018)
Published in Journal of clinical oncology (20.05.2018)
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Journal Article
Immune Repertoire Analysis of Multiple Myeloma Research Samples Using NGS Characterization of Multiple B Cell Receptors in a Single Reaction
Lowman, Geoffrey, Pastushok, Landon, Mochoruk, Karen, Hill, Wayne, Toro, Michelle, Pickle, Loni, Gonzalez, Carolina, Ostresh, Stephanie, Sarda, Shrutii, Yang, Chenchen, Stakiw, Julie, Bosch, Mark J., Goubran, Hadi Alphonse, Geyer, Ronald, DeCoteau, John
Published in Blood (23.11.2021)
Published in Blood (23.11.2021)
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Journal Article
The Epithelial-Stromal Microenvironment in Early Colonic Neoplasia
Ideta, Takayasu, Li, Boyang, Flynn, Christopher, Igarashi, Yuichi, Lowman, Geoffrey, Looney, Tim, Devers, Thomas J, Birk, John, Forouhar, Faripour, Giardina, Charles, Rosenberg, Daniel W
Published in Molecular cancer research (01.01.2022)
Published in Molecular cancer research (01.01.2022)
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Journal Article
Abstract 3994: Using NGS to characterize 40 NSCLC tumor with gene expression and tumor infiltrating T cell repertoire profiling from FFPE and matched Fresh Frozen samples
Mongan, Ann, Lowman, Geoffrey, Ku, Yuan-Chieh, Looney, Timothy, Lin, Lifeng, Peng, Xinzhan, Hyland, Fiona
Published in Cancer research (Chicago, Ill.) (01.07.2017)
Published in Cancer research (Chicago, Ill.) (01.07.2017)
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Journal Article
T cell receptor beta immune repertoire sequencing in FFPE preserved samples: Increasing flexibility and applicability for immuno-oncology studies
Miller, Lauren, Linch, Elizabeth, Zheng, Jianping, Topacio-Hall, Denise, Looney, Timothy, Lowman, Geoffrey, Hyland, Fiona, Andersen, Mark
Published in Journal of clinical oncology (20.05.2018)
Published in Journal of clinical oncology (20.05.2018)
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Journal Article
Abstract 2940: Somatic hypermutation analysis of chronic lymphocytic leukemia research samples by IGH chain next-generation sequencing
Toro, Michelle, Pickle, Loni, Sarda, Shrutii, Marshall, Robyn, Pieterse, Bonnie, Venter, Tania, Yang, Chenchen, Gerdener, Theo, Lowman, Geoffrey Marc
Published in Cancer research (Chicago, Ill.) (15.06.2022)
Published in Cancer research (Chicago, Ill.) (15.06.2022)
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Journal Article
Abstract 1631: Sequencing the circulating and infiltrating T-cell repertoire on the Ion S5TM
Lowman, Geoffrey, Linch, Elizabeth, Miller, Lauren, Topacio-Hall, Denise, Looney, Timothy, Pankov, Alex, Sun, Yongming, Peng, Xinzhan, Andersen, Mark, Hyland, Fiona, Mongan, Ann
Published in Cancer research (Chicago, Ill.) (01.07.2017)
Published in Cancer research (Chicago, Ill.) (01.07.2017)
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Journal Article
Abstract 3567: Sequencing the human TCRβ repertoire on the Ion S5™ System
Topacio-Hall, Denise S., Looney, Tim, Sun, Yongming, Miller, Lauren, Linch, Elizabeth, Lowman, Geoffrey, Lin, Lifeng, Andersen, Mark, Hyland, Fiona, Mongan, Ann
Published in Cancer research (Chicago, Ill.) (01.07.2017)
Published in Cancer research (Chicago, Ill.) (01.07.2017)
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Journal Article
Tracking the interplay between circulating and tumor-infiltrating T cells using AmpliSeq-based Ion Torrent TCRβ immune repertoire sequencing
Looney, Timothy, Lowman, Geoffrey, Linch, Elizabeth, Topacio, Denise, Miller, Lauren, Lin, Lifeng, Pankov, Aleksandr, Au-Young, Janice, Andersen, Mark, Mongan, Ann, Hyland, Fiona
Published in Journal of clinical oncology (20.05.2017)
Published in Journal of clinical oncology (20.05.2017)
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