Domain Analysis and Motif Matcher (DAMM): A Program to Predict Selectivity Determinants in Monosiga brevicollis PDZ Domains Using Human PDZ Data
Wofford, Haley A., Myers-Dean, Josh, Vogel, Brandon A., Alamo, Kevin Alexander Estrada, Longshore-Neate, Frederick A., Jagodzinski, Filip, Amacher, Jeanine F.
Published in Molecules (Basel, Switzerland) (05.10.2021)
Published in Molecules (Basel, Switzerland) (05.10.2021)
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Journal Article
Stereochemical Preferences Modulate Affinity and Selectivity among Five PDZ Domains that Bind CFTR: Comparative Structural and Sequence Analyses
Amacher, Jeanine F., Cushing, Patrick R., Brooks, Lionel, Boisguerin, Prisca, Madden, Dean R.
Published in Structure (London) (07.01.2014)
Published in Structure (London) (07.01.2014)
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Journal Article
Chemically modified peptide scaffolds target the CFTR-associated ligand PDZ domain
Amacher, Jeanine F, Zhao, Ruizhi, Spaller, Mark R, Madden, Dean R
Published in PloS one (19.08.2014)
Published in PloS one (19.08.2014)
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Journal Article
Saturation mutagenesis of a predicted ancestral Syk‐family kinase
Hobbs, Helen T., Shah, Neel H., Shoemaker, Sophie R., Amacher, Jeanine F., Marqusee, Susan, Kuriyan, John
Published in Protein science (01.10.2022)
Published in Protein science (01.10.2022)
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Journal Article
MotifAnalyzer‐PDZ: A computational program to investigate the evolution of PDZ‐binding target specificity
Valgardson, Jordan, Cosbey, Robin, Houser, Paul, Rupp, Milo, Van Bronkhorst, Raiden, Lee, Michael, Jagodzinski, Filip, Amacher, Jeanine F.
Published in Protein science (01.12.2019)
Published in Protein science (01.12.2019)
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Journal Article
Sequence variation in the β7–β8 loop of bacterial class A sortase enzymes alters substrate selectivity
Piper, Isabel M., Struyvenberg, Sarah A., Valgardson, Jordan D., Johnson, D. Alex, Gao, Melody, Johnston, Katherine, Svendsen, Justin E., Kodama, Hanna M., Hvorecny, Kelli L., Antos, John M., Amacher, Jeanine F.
Published in The Journal of biological chemistry (01.08.2021)
Published in The Journal of biological chemistry (01.08.2021)
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Journal Article
Structural and biochemical analyses of selectivity determinants in chimeric Streptococcus Class A sortase enzymes
Gao, Melody, Johnson, D. Alex, Piper, Isabel M., Kodama, Hanna M., Svendsen, Justin E., Tahti, Elise, Longshore‐Neate, Frederick, Vogel, Brandon, Antos, John M., Amacher, Jeanine F.
Published in Protein science (01.03.2022)
Published in Protein science (01.03.2022)
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Journal Article
Structures of Streptococcus pyogenes class A sortase in complex with substrate and product mimics provide key details of target recognition
Johnson, D. Alex, Piper, Isabel M., Vogel, Brandon A., Jackson, Sophie N., Svendsen, Justin E., Kodama, Hanna M., Lee, Darren E., Lindblom, Katy M., McCarty, James, Antos, John M., Amacher, Jeanine F.
Published in The Journal of biological chemistry (01.10.2022)
Published in The Journal of biological chemistry (01.10.2022)
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Journal Article
Additive energetic contributions of multiple peptide positions determine the relative promiscuity of viral and human sequences for PDZ domain targets
Tahti, Elise F., Blount, Jadon M., Jackson, Sophie N., Gao, Melody, Gill, Nicholas P., Smith, Sarah N., Pederson, Nick J., Rumph, Simone N., Struyvenberg, Sarah A., Mackley, Iain G. P., Madden, Dean R., Amacher, Jeanine F.
Published in Protein science (01.04.2023)
Published in Protein science (01.04.2023)
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Journal Article
Phosphorylation control of the ubiquitin ligase Cbl is conserved in choanoflagellates
Amacher, Jeanine F., Hobbs, Helen T., Cantor, Aaron C., Shah, Lochan, Rivero, Marco‐Jose, Mulchand, Sarah A., Kuriyan, John
Published in Protein science (01.05.2018)
Published in Protein science (01.05.2018)
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Journal Article
Structural characterization and computational analysis of PDZ domains in Monosiga brevicollis
Gao, Melody, Mackley, Iain G. P., Mesbahi‐Vasey, Samaneh, Bamonte, Haley A., Struyvenberg, Sarah A., Landolt, Louisa, Pederson, Nick J., Williams, Lucy I., Bahl, Christopher D., Brooks, Lionel, Amacher, Jeanine F.
Published in Protein science (01.11.2020)
Published in Protein science (01.11.2020)
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Journal Article
Stereochemical determinants of C-terminal specificity in PDZ peptide-binding domains: a novel contribution of the carboxylate-binding loop
Amacher, Jeanine F, Cushing, Patrick R, Bahl, Christopher D, Beck, Tobias, Madden, Dean R
Published in The Journal of biological chemistry (15.02.2013)
Published in The Journal of biological chemistry (15.02.2013)
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Journal Article
Crystallization and preliminary diffraction analysis of the CAL PDZ domain in complex with a selective peptide inhibitor
Amacher, Jeanine F., Cushing, Patrick R., Weiner, Joshua A., Madden, Dean R.
Published in Acta crystallographica. Section F, Structural biology and crystallization communications (01.05.2011)
Published in Acta crystallographica. Section F, Structural biology and crystallization communications (01.05.2011)
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Journal Article
Structures of Streptococcus pyogenes class A sortase in complex with substrate and product mimics provide key details of target recognition
Johnson, D. Alex, Piper, Isabel M., Vogel, Brandon A., Jackson, Sophie N., Svendsen, Justin E., Kodama, Hanna M., Lee, Darren E., Lindblom, Katy M., McCarty, James, Antos, John M., Amacher, Jeanine F.
Published in The Journal of biological chemistry (01.10.2022)
Published in The Journal of biological chemistry (01.10.2022)
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Journal Article